Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.16■□□□□ 0.18
CENPAP49450 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC16.16■□□□□ 0.18
CENPAP49450 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
CENPAP49450 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
CENPAP49450 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CENPAP49450 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CENPAP49450 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC16.16■□□□□ 0.18
CENPAP49450 DUTP2-201ENST00000519164 463 ntBASIC16.16■□□□□ 0.18
CENPAP49450 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC16.16■□□□□ 0.18
CENPAP49450 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.16■□□□□ 0.18
CENPAP49450 CLN6-221ENST00000637494 765 ntTSL 5 BASIC16.16■□□□□ 0.18
CENPAP49450 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.16■□□□□ 0.18
CENPAP49450 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CENPAP49450 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
CENPAP49450 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CENPAP49450 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
CENPAP49450 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
CENPAP49450 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CENPAP49450 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CENPAP49450 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CENPAP49450 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CENPAP49450 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CENPAP49450 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CENPAP49450 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CENPAP49450 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CENPAP49450 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CENPAP49450 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CENPAP49450 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.15■□□□□ 0.18
CENPAP49450 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.15■□□□□ 0.18
CENPAP49450 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CENPAP49450 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CENPAP49450 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
CENPAP49450 LINC01568-207ENST00000641790 1380 ntBASIC16.15■□□□□ 0.18
CENPAP49450 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CENPAP49450 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CENPAP49450 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CENPAP49450 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CENPAP49450 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CENPAP49450 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CENPAP49450 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CENPAP49450 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CENPAP49450 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC16.15■□□□□ 0.18
CENPAP49450 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CENPAP49450 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CENPAP49450 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
CENPAP49450 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.15■□□□□ 0.18
CENPAP49450 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CENPAP49450 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.15■□□□□ 0.18
CENPAP49450 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC16.15■□□□□ 0.18
CENPAP49450 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CENPAP49450 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.15■□□□□ 0.18
CENPAP49450 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CENPAP49450 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CENPAP49450 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
CENPAP49450 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CENPAP49450 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CENPAP49450 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CENPAP49450 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.15■□□□□ 0.18
CENPAP49450 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CENPAP49450 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CENPAP49450 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.15■□□□□ 0.18
CENPAP49450 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC16.15■□□□□ 0.18
CENPAP49450 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.15■□□□□ 0.18
CENPAP49450 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CENPAP49450 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.14■□□□□ 0.18
CENPAP49450 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
CENPAP49450 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CENPAP49450 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CENPAP49450 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CENPAP49450 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.14■□□□□ 0.17
CENPAP49450 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CENPAP49450 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CENPAP49450 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CENPAP49450 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CENPAP49450 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CENPAP49450 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CENPAP49450 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
CENPAP49450 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CENPAP49450 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CENPAP49450 CRAT-202ENST00000393384 973 ntTSL 2 BASIC16.14■□□□□ 0.17
CENPAP49450 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CENPAP49450 HMGA1P5-201ENST00000412453 271 ntBASIC16.14■□□□□ 0.17
CENPAP49450 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC16.14■□□□□ 0.17
CENPAP49450 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CENPAP49450 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.14■□□□□ 0.17
CENPAP49450 AC093827.2-201ENST00000512654 315 ntBASIC16.14■□□□□ 0.17
CENPAP49450 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
CENPAP49450 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC16.14■□□□□ 0.17
CENPAP49450 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.14■□□□□ 0.17
CENPAP49450 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CENPAP49450 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC16.14■□□□□ 0.17
CENPAP49450 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC16.14■□□□□ 0.17
CENPAP49450 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.14■□□□□ 0.17
CENPAP49450 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
CENPAP49450 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.14■□□□□ 0.17
CENPAP49450 LINC00896-202ENST00000609602 2128 ntBASIC16.14■□□□□ 0.17
CENPAP49450 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CENPAP49450 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CENPAP49450 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
CENPAP49450 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms