Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 AL441883.1-201ENST00000566170 1045 ntBASIC17.27■□□□□ 0.36
KRT6CP48668 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
KRT6CP48668 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
KRT6CP48668 AC133561.5-201ENST00000635547 218 ntBASIC17.27■□□□□ 0.36
KRT6CP48668 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
KRT6CP48668 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
KRT6CP48668 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
KRT6CP48668 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.27■□□□□ 0.35
KRT6CP48668 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
KRT6CP48668 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.27■□□□□ 0.35
KRT6CP48668 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.27■□□□□ 0.35
KRT6CP48668 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
KRT6CP48668 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
KRT6CP48668 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.26■□□□□ 0.35
KRT6CP48668 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
KRT6CP48668 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
KRT6CP48668 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
KRT6CP48668 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.26■□□□□ 0.35
KRT6CP48668 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.26■□□□□ 0.35
KRT6CP48668 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
KRT6CP48668 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
KRT6CP48668 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
KRT6CP48668 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.26■□□□□ 0.35
KRT6CP48668 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.26■□□□□ 0.35
KRT6CP48668 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
KRT6CP48668 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
KRT6CP48668 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
KRT6CP48668 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.26■□□□□ 0.35
KRT6CP48668 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
KRT6CP48668 STARP1-201ENST00000397973 869 ntBASIC17.26■□□□□ 0.35
KRT6CP48668 AC113347.1-201ENST00000413321 391 ntBASIC17.26■□□□□ 0.35
KRT6CP48668 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.26■□□□□ 0.35
KRT6CP48668 AC079602.3-201ENST00000623931 403 ntBASIC17.26■□□□□ 0.35
KRT6CP48668 AC073912.3-201ENST00000624414 853 ntBASIC17.26■□□□□ 0.35
KRT6CP48668 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
KRT6CP48668 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
KRT6CP48668 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
KRT6CP48668 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
KRT6CP48668 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.26■□□□□ 0.35
KRT6CP48668 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
KRT6CP48668 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
KRT6CP48668 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
KRT6CP48668 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
KRT6CP48668 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.26■□□□□ 0.35
KRT6CP48668 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.26■□□□□ 0.35
KRT6CP48668 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
KRT6CP48668 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
KRT6CP48668 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.26■□□□□ 0.35
KRT6CP48668 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
KRT6CP48668 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
KRT6CP48668 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
KRT6CP48668 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
KRT6CP48668 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
KRT6CP48668 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
KRT6CP48668 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
KRT6CP48668 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
KRT6CP48668 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.25■□□□□ 0.35
KRT6CP48668 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
KRT6CP48668 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.25■□□□□ 0.35
KRT6CP48668 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
KRT6CP48668 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
KRT6CP48668 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.25■□□□□ 0.35
KRT6CP48668 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.25■□□□□ 0.35
KRT6CP48668 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
KRT6CP48668 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
KRT6CP48668 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
KRT6CP48668 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
KRT6CP48668 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
KRT6CP48668 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
KRT6CP48668 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
KRT6CP48668 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.25■□□□□ 0.35
KRT6CP48668 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
KRT6CP48668 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.25■□□□□ 0.35
KRT6CP48668 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.25■□□□□ 0.35
KRT6CP48668 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
KRT6CP48668 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
KRT6CP48668 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.25■□□□□ 0.35
KRT6CP48668 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
KRT6CP48668 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
KRT6CP48668 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
KRT6CP48668 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
KRT6CP48668 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
KRT6CP48668 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
KRT6CP48668 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
KRT6CP48668 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
KRT6CP48668 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
KRT6CP48668 SIRPAP1-201ENST00000448467 1770 ntBASIC17.25■□□□□ 0.35
KRT6CP48668 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.25■□□□□ 0.35
KRT6CP48668 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
KRT6CP48668 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
KRT6CP48668 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.25■□□□□ 0.35
KRT6CP48668 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
KRT6CP48668 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.25■□□□□ 0.35
KRT6CP48668 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.24■□□□□ 0.35
KRT6CP48668 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
KRT6CP48668 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.24■□□□□ 0.35
KRT6CP48668 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.24■□□□□ 0.35
KRT6CP48668 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
KRT6CP48668 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
KRT6CP48668 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms