Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
RFC5P40937 AD001527.2-201ENST00000622994 785 ntBASIC19.61■□□□□ 0.73
RFC5P40937 TP73-AS1-207ENST00000624167 988 ntBASIC19.61■□□□□ 0.73
RFC5P40937 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RFC5P40937 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RFC5P40937 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RFC5P40937 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RFC5P40937 HLA-DQB1-201ENST00000374943 1656 ntBASIC19.61■□□□□ 0.73
RFC5P40937 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC19.61■□□□□ 0.73
RFC5P40937 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.61■□□□□ 0.73
RFC5P40937 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RFC5P40937 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC19.61■□□□□ 0.73
RFC5P40937 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RFC5P40937 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RFC5P40937 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.61■□□□□ 0.73
RFC5P40937 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC19.61■□□□□ 0.73
RFC5P40937 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RFC5P40937 AC005332.8-201ENST00000622750 2735 ntBASIC19.6■□□□□ 0.73
RFC5P40937 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RFC5P40937 LTB4R2-202ENST00000528054 3092 ntBASIC19.6■□□□□ 0.73
RFC5P40937 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RFC5P40937 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.6■□□□□ 0.73
RFC5P40937 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC19.6■□□□□ 0.73
RFC5P40937 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
RFC5P40937 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.6■□□□□ 0.73
RFC5P40937 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RFC5P40937 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC19.6■□□□□ 0.73
RFC5P40937 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC19.6■□□□□ 0.73
RFC5P40937 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC19.6■□□□□ 0.73
RFC5P40937 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC19.6■□□□□ 0.73
RFC5P40937 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC19.6■□□□□ 0.73
RFC5P40937 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC19.6■□□□□ 0.73
RFC5P40937 AL662844.1-201ENST00000546340 181 ntBASIC19.6■□□□□ 0.73
RFC5P40937 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC19.6■□□□□ 0.73
RFC5P40937 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC19.6■□□□□ 0.73
RFC5P40937 AC064862.7-201ENST00000604520 867 ntBASIC19.6■□□□□ 0.73
RFC5P40937 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RFC5P40937 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC19.6■□□□□ 0.73
RFC5P40937 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RFC5P40937 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
RFC5P40937 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
RFC5P40937 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
RFC5P40937 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RFC5P40937 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RFC5P40937 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RFC5P40937 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RFC5P40937 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RFC5P40937 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC19.59■□□□□ 0.73
RFC5P40937 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RFC5P40937 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
RFC5P40937 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RFC5P40937 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RFC5P40937 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RFC5P40937 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RFC5P40937 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RFC5P40937 PMPCAP1-201ENST00000508114 1576 ntBASIC19.59■□□□□ 0.73
RFC5P40937 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
RFC5P40937 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC19.59■□□□□ 0.73
RFC5P40937 HIST2H3DP1-201ENST00000401004 416 ntBASIC19.59■□□□□ 0.73
RFC5P40937 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC19.59■□□□□ 0.73
RFC5P40937 FAM197Y8-203ENST00000450145 560 ntBASIC19.59■□□□□ 0.73
RFC5P40937 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
RFC5P40937 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RFC5P40937 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC19.59■□□□□ 0.73
RFC5P40937 TMED1-207ENST00000591695 809 ntTSL 5 BASIC19.59■□□□□ 0.73
RFC5P40937 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC19.59■□□□□ 0.73
RFC5P40937 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.59■□□□□ 0.73
RFC5P40937 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.59■□□□□ 0.73
RFC5P40937 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
RFC5P40937 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RFC5P40937 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC19.59■□□□□ 0.73
RFC5P40937 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
RFC5P40937 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.73
RFC5P40937 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
RFC5P40937 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
RFC5P40937 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
RFC5P40937 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RFC5P40937 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
RFC5P40937 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC19.58■□□□□ 0.73
RFC5P40937 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RFC5P40937 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC19.58■□□□□ 0.73
RFC5P40937 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC19.58■□□□□ 0.73
RFC5P40937 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RFC5P40937 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RFC5P40937 TLE1-202ENST00000376484 666 ntTSL 3 BASIC19.58■□□□□ 0.72
RFC5P40937 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RFC5P40937 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC19.58■□□□□ 0.72
RFC5P40937 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RFC5P40937 SLC25A6P4-201ENST00000586535 553 ntBASIC19.58■□□□□ 0.72
RFC5P40937 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RFC5P40937 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC19.58■□□□□ 0.72
RFC5P40937 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RFC5P40937 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC19.58■□□□□ 0.72
RFC5P40937 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
RFC5P40937 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RFC5P40937 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
RFC5P40937 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RFC5P40937 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC19.58■□□□□ 0.72
RFC5P40937 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RFC5P40937 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms