Protein–RNA interactions for Protein: P35712

SOX6, Transcription factor SOX-6, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6P35712 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SOX6P35712 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
SOX6P35712 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC15.99■□□□□ 0.15
SOX6P35712 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC15.99■□□□□ 0.15
SOX6P35712 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC15.99■□□□□ 0.15
SOX6P35712 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC15.99■□□□□ 0.15
SOX6P35712 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC15.99■□□□□ 0.15
SOX6P35712 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SOX6P35712 SP100-208ENST00000427101 1922 ntTSL 2 BASIC15.99■□□□□ 0.15
SOX6P35712 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.99■□□□□ 0.15
SOX6P35712 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
SOX6P35712 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
SOX6P35712 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SOX6P35712 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC15.99■□□□□ 0.15
SOX6P35712 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
SOX6P35712 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SOX6P35712 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SOX6P35712 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
SOX6P35712 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SOX6P35712 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.98■□□□□ 0.15
SOX6P35712 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.98■□□□□ 0.15
SOX6P35712 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SOX6P35712 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
SOX6P35712 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
SOX6P35712 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SOX6P35712 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SOX6P35712 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SOX6P35712 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SOX6P35712 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
SOX6P35712 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SOX6P35712 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SOX6P35712 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC15.98■□□□□ 0.15
SOX6P35712 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC15.98■□□□□ 0.15
SOX6P35712 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.98■□□□□ 0.15
SOX6P35712 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
SOX6P35712 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC15.98■□□□□ 0.15
SOX6P35712 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC15.98■□□□□ 0.15
SOX6P35712 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.98■□□□□ 0.15
SOX6P35712 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
SOX6P35712 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
SOX6P35712 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC15.98■□□□□ 0.15
SOX6P35712 HLA-A-209ENST00000638375 975 ntBASIC15.98■□□□□ 0.15
SOX6P35712 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
SOX6P35712 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
SOX6P35712 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
SOX6P35712 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
SOX6P35712 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SOX6P35712 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SOX6P35712 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC15.98■□□□□ 0.15
SOX6P35712 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC15.98■□□□□ 0.15
SOX6P35712 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC15.98■□□□□ 0.15
SOX6P35712 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SOX6P35712 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SOX6P35712 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.98■□□□□ 0.15
SOX6P35712 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SOX6P35712 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
SOX6P35712 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SOX6P35712 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
SOX6P35712 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC15.97■□□□□ 0.15
SOX6P35712 LINC01126-201ENST00000623515 1646 ntBASIC15.97■□□□□ 0.15
SOX6P35712 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SOX6P35712 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC15.97■□□□□ 0.15
SOX6P35712 MST1L-201ENST00000442552 2185 ntBASIC15.97■□□□□ 0.15
SOX6P35712 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SOX6P35712 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SOX6P35712 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
SOX6P35712 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
SOX6P35712 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SOX6P35712 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
SOX6P35712 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
SOX6P35712 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SOX6P35712 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SOX6P35712 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC15.97■□□□□ 0.15
SOX6P35712 GATS-209ENST00000454084 1030 ntTSL 3 BASIC15.97■□□□□ 0.15
SOX6P35712 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
SOX6P35712 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SOX6P35712 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC15.97■□□□□ 0.15
SOX6P35712 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
SOX6P35712 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
SOX6P35712 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SOX6P35712 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
SOX6P35712 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC15.97■□□□□ 0.15
SOX6P35712 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SOX6P35712 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SOX6P35712 AL603756.1-201ENST00000606511 2163 ntBASIC15.97■□□□□ 0.15
SOX6P35712 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SOX6P35712 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC15.97■□□□□ 0.15
SOX6P35712 AC093010.1-201ENST00000473625 1624 ntBASIC15.97■□□□□ 0.15
SOX6P35712 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SOX6P35712 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SOX6P35712 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
SOX6P35712 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SOX6P35712 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
SOX6P35712 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
SOX6P35712 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
SOX6P35712 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
SOX6P35712 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SOX6P35712 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SOX6P35712 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SOX6P35712 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms