Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.73■□□□□ 0.27
CCL4P13236 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCL4P13236 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCL4P13236 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCL4P13236 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCL4P13236 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CCL4P13236 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CCL4P13236 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCL4P13236 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CCL4P13236 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCL4P13236 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.72■□□□□ 0.27
CCL4P13236 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCL4P13236 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CCL4P13236 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCL4P13236 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CCL4P13236 COA5-202ENST00000409997 557 ntTSL 4 BASIC16.72■□□□□ 0.27
CCL4P13236 KLF4P1-201ENST00000412782 1185 ntBASIC16.72■□□□□ 0.27
CCL4P13236 URGCP-206ENST00000446958 365 ntTSL 2 BASIC16.72■□□□□ 0.27
CCL4P13236 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CCL4P13236 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.72■□□□□ 0.27
CCL4P13236 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.72■□□□□ 0.27
CCL4P13236 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCL4P13236 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CCL4P13236 AC109462.3-201ENST00000573934 613 ntBASIC16.72■□□□□ 0.27
CCL4P13236 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.72■□□□□ 0.27
CCL4P13236 AC019129.2-201ENST00000609837 1235 ntBASIC16.72■□□□□ 0.27
CCL4P13236 AC079781.4-201ENST00000641908 219 ntBASIC16.72■□□□□ 0.27
CCL4P13236 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCL4P13236 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCL4P13236 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCL4P13236 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCL4P13236 AC135776.1-201ENST00000319817 2481 ntBASIC16.72■□□□□ 0.27
CCL4P13236 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CCL4P13236 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.72■□□□□ 0.27
CCL4P13236 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CCL4P13236 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC16.72■□□□□ 0.27
CCL4P13236 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CCL4P13236 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.72■□□□□ 0.27
CCL4P13236 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCL4P13236 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CCL4P13236 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCL4P13236 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCL4P13236 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CCL4P13236 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCL4P13236 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CCL4P13236 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.71■□□□□ 0.27
CCL4P13236 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCL4P13236 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.71■□□□□ 0.27
CCL4P13236 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCL4P13236 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCL4P13236 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCL4P13236 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC16.71■□□□□ 0.27
CCL4P13236 CRYGEP-201ENST00000412192 528 ntBASIC16.71■□□□□ 0.27
CCL4P13236 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.71■□□□□ 0.27
CCL4P13236 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
CCL4P13236 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.71■□□□□ 0.27
CCL4P13236 SIGLEC30P-201ENST00000455569 941 ntBASIC16.71■□□□□ 0.27
CCL4P13236 AC108073.2-201ENST00000464002 357 ntBASIC16.71■□□□□ 0.27
CCL4P13236 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC16.71■□□□□ 0.27
CCL4P13236 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.71■□□□□ 0.27
CCL4P13236 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CCL4P13236 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CCL4P13236 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.71■□□□□ 0.27
CCL4P13236 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.71■□□□□ 0.27
CCL4P13236 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.71■□□□□ 0.27
CCL4P13236 MIR4751-201ENST00000578027 74 ntBASIC16.71■□□□□ 0.27
CCL4P13236 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC16.71■□□□□ 0.27
CCL4P13236 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.71■□□□□ 0.27
CCL4P13236 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCL4P13236 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CCL4P13236 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.71■□□□□ 0.27
CCL4P13236 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CCL4P13236 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CCL4P13236 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
CCL4P13236 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CCL4P13236 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
CCL4P13236 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
CCL4P13236 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
CCL4P13236 NCF1C-201ENST00000438382 1427 ntBASIC16.7■□□□□ 0.26
CCL4P13236 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCL4P13236 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCL4P13236 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCL4P13236 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CCL4P13236 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCL4P13236 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCL4P13236 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.7■□□□□ 0.26
CCL4P13236 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCL4P13236 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCL4P13236 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCL4P13236 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCL4P13236 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.7■□□□□ 0.26
CCL4P13236 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCL4P13236 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.7■□□□□ 0.26
CCL4P13236 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.7■□□□□ 0.26
CCL4P13236 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CCL4P13236 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.7■□□□□ 0.26
CCL4P13236 AC003669.1-201ENST00000334569 611 ntBASIC16.7■□□□□ 0.26
CCL4P13236 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.7■□□□□ 0.26
CCL4P13236 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.7■□□□□ 0.26
CCL4P13236 PMS2P2-201ENST00000425039 1128 ntBASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms