Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CTSDP07339 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC14.79□□□□□ -0.04
CTSDP07339 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CTSDP07339 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CTSDP07339 AC016396.2-201ENST00000562575 1417 ntBASIC14.79□□□□□ -0.04
CTSDP07339 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC14.79□□□□□ -0.04
CTSDP07339 AC008687.5-201ENST00000593746 558 ntBASIC14.79□□□□□ -0.04
CTSDP07339 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CTSDP07339 ITM2C-210ENST00000620962 501 ntBASIC14.79□□□□□ -0.04
CTSDP07339 REXO1L11P-201ENST00000620964 1927 ntBASIC14.79□□□□□ -0.04
CTSDP07339 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
CTSDP07339 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC14.79□□□□□ -0.04
CTSDP07339 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC14.79□□□□□ -0.04
CTSDP07339 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
CTSDP07339 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC14.79□□□□□ -0.04
CTSDP07339 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CTSDP07339 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CTSDP07339 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CTSDP07339 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CTSDP07339 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CTSDP07339 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
CTSDP07339 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CTSDP07339 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CTSDP07339 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
CTSDP07339 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CTSDP07339 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CTSDP07339 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC14.78□□□□□ -0.04
CTSDP07339 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CTSDP07339 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CTSDP07339 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CTSDP07339 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CTSDP07339 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC14.78□□□□□ -0.04
CTSDP07339 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CTSDP07339 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CTSDP07339 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CTSDP07339 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC14.78□□□□□ -0.04
CTSDP07339 AC097488.1-201ENST00000507834 756 ntBASIC14.78□□□□□ -0.04
CTSDP07339 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC14.78□□□□□ -0.04
CTSDP07339 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC14.78□□□□□ -0.04
CTSDP07339 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC14.78□□□□□ -0.04
CTSDP07339 C1QBPP2-201ENST00000528754 825 ntBASIC14.78□□□□□ -0.04
CTSDP07339 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CTSDP07339 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC14.78□□□□□ -0.04
CTSDP07339 MMD2-204ENST00000612910 778 ntTSL 5 BASIC14.78□□□□□ -0.04
CTSDP07339 CR769767.2-201ENST00000622735 460 ntBASIC14.78□□□□□ -0.04
CTSDP07339 AC112497.1-201ENST00000624824 639 ntBASIC14.78□□□□□ -0.04
CTSDP07339 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CTSDP07339 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CTSDP07339 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CTSDP07339 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CTSDP07339 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CTSDP07339 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC14.78□□□□□ -0.04
CTSDP07339 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CTSDP07339 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CTSDP07339 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CTSDP07339 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CTSDP07339 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
CTSDP07339 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC14.78□□□□□ -0.04
CTSDP07339 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC14.78□□□□□ -0.04
CTSDP07339 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC14.78□□□□□ -0.04
CTSDP07339 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
CTSDP07339 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC14.77□□□□□ -0.04
CTSDP07339 PCDHB19P-201ENST00000570871 2371 ntBASIC14.77□□□□□ -0.04
CTSDP07339 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
CTSDP07339 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
CTSDP07339 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CTSDP07339 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CTSDP07339 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC14.77□□□□□ -0.04
CTSDP07339 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.04
CTSDP07339 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CTSDP07339 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
CTSDP07339 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CTSDP07339 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.04
CTSDP07339 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC14.77□□□□□ -0.04
CTSDP07339 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC14.77□□□□□ -0.05
CTSDP07339 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC14.77□□□□□ -0.05
CTSDP07339 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CTSDP07339 DDX43P3-201ENST00000441064 443 ntBASIC14.77□□□□□ -0.05
CTSDP07339 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CTSDP07339 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC14.77□□□□□ -0.05
CTSDP07339 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC14.77□□□□□ -0.05
CTSDP07339 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC14.77□□□□□ -0.05
CTSDP07339 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CTSDP07339 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CTSDP07339 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
CTSDP07339 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CTSDP07339 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC14.77□□□□□ -0.05
CTSDP07339 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CTSDP07339 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CTSDP07339 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CTSDP07339 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CTSDP07339 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CTSDP07339 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CTSDP07339 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CTSDP07339 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC14.76□□□□□ -0.05
CTSDP07339 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC14.76□□□□□ -0.05
CTSDP07339 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC14.76□□□□□ -0.05
CTSDP07339 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CTSDP07339 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CTSDP07339 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms