Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.26■□□□□ 0.35
KRT6AP02538 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
KRT6AP02538 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
KRT6AP02538 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
KRT6AP02538 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
KRT6AP02538 STARP1-201ENST00000397973 869 ntBASIC17.26■□□□□ 0.35
KRT6AP02538 AC113347.1-201ENST00000413321 391 ntBASIC17.26■□□□□ 0.35
KRT6AP02538 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.26■□□□□ 0.35
KRT6AP02538 AC079602.3-201ENST00000623931 403 ntBASIC17.26■□□□□ 0.35
KRT6AP02538 AC073912.3-201ENST00000624414 853 ntBASIC17.26■□□□□ 0.35
KRT6AP02538 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
KRT6AP02538 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
KRT6AP02538 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
KRT6AP02538 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
KRT6AP02538 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
KRT6AP02538 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.26■□□□□ 0.35
KRT6AP02538 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
KRT6AP02538 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
KRT6AP02538 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
KRT6AP02538 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
KRT6AP02538 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.26■□□□□ 0.35
KRT6AP02538 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.26■□□□□ 0.35
KRT6AP02538 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
KRT6AP02538 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
KRT6AP02538 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.26■□□□□ 0.35
KRT6AP02538 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
KRT6AP02538 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
KRT6AP02538 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
KRT6AP02538 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
KRT6AP02538 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
KRT6AP02538 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.25■□□□□ 0.35
KRT6AP02538 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
KRT6AP02538 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
KRT6AP02538 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
KRT6AP02538 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.25■□□□□ 0.35
KRT6AP02538 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
KRT6AP02538 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
KRT6AP02538 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.25■□□□□ 0.35
KRT6AP02538 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.25■□□□□ 0.35
KRT6AP02538 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
KRT6AP02538 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
KRT6AP02538 PRORSD1P-202ENST00000563365 2154 ntBASIC17.25■□□□□ 0.35
KRT6AP02538 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
KRT6AP02538 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
KRT6AP02538 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
KRT6AP02538 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
KRT6AP02538 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
KRT6AP02538 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
KRT6AP02538 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
KRT6AP02538 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.25■□□□□ 0.35
KRT6AP02538 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
KRT6AP02538 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.25■□□□□ 0.35
KRT6AP02538 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.25■□□□□ 0.35
KRT6AP02538 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
KRT6AP02538 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
KRT6AP02538 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.25■□□□□ 0.35
KRT6AP02538 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
KRT6AP02538 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
KRT6AP02538 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
KRT6AP02538 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
KRT6AP02538 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
KRT6AP02538 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
KRT6AP02538 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.25■□□□□ 0.35
KRT6AP02538 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
KRT6AP02538 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
KRT6AP02538 SIRPAP1-201ENST00000448467 1770 ntBASIC17.25■□□□□ 0.35
KRT6AP02538 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.25■□□□□ 0.35
KRT6AP02538 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
KRT6AP02538 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.25■□□□□ 0.35
KRT6AP02538 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
KRT6AP02538 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.25■□□□□ 0.35
KRT6AP02538 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.24■□□□□ 0.35
KRT6AP02538 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
KRT6AP02538 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.24■□□□□ 0.35
KRT6AP02538 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.24■□□□□ 0.35
KRT6AP02538 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
KRT6AP02538 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
KRT6AP02538 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
KRT6AP02538 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
KRT6AP02538 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
KRT6AP02538 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
KRT6AP02538 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
KRT6AP02538 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
KRT6AP02538 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.24■□□□□ 0.35
KRT6AP02538 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
KRT6AP02538 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
KRT6AP02538 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
KRT6AP02538 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.24■□□□□ 0.35
KRT6AP02538 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.24■□□□□ 0.35
KRT6AP02538 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
KRT6AP02538 HLA-F-220ENST00000434407 884 ntBASIC17.24■□□□□ 0.35
KRT6AP02538 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
KRT6AP02538 DDX43P3-201ENST00000441064 443 ntBASIC17.24■□□□□ 0.35
KRT6AP02538 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
KRT6AP02538 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.24■□□□□ 0.35
KRT6AP02538 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.24■□□□□ 0.35
KRT6AP02538 AC009154.2-201ENST00000621177 724 ntBASIC17.24■□□□□ 0.35
KRT6AP02538 AC011558.1-201ENST00000623459 338 ntBASIC17.24■□□□□ 0.35
KRT6AP02538 AC097493.4-201ENST00000641197 219 ntBASIC17.24■□□□□ 0.35
KRT6AP02538 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms