Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL4A1P02462 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC21.59■■□□□ 1.05
COL4A1P02462 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC21.59■■□□□ 1.05
COL4A1P02462 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC21.59■■□□□ 1.05
COL4A1P02462 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL4A1P02462 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL4A1P02462 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
COL4A1P02462 AC211486.1-202ENST00000416371 468 ntBASIC21.59■■□□□ 1.05
COL4A1P02462 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
COL4A1P02462 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC21.59■■□□□ 1.05
COL4A1P02462 AC211476.1-201ENST00000503899 468 ntBASIC21.59■■□□□ 1.05
COL4A1P02462 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
COL4A1P02462 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC21.59■■□□□ 1.05
COL4A1P02462 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC21.59■■□□□ 1.05
COL4A1P02462 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC21.59■■□□□ 1.05
COL4A1P02462 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL4A1P02462 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC21.59■■□□□ 1.05
COL4A1P02462 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL4A1P02462 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
COL4A1P02462 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL4A1P02462 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
COL4A1P02462 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
COL4A1P02462 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
COL4A1P02462 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
COL4A1P02462 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC21.58■■□□□ 1.05
COL4A1P02462 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC21.58■■□□□ 1.05
COL4A1P02462 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
COL4A1P02462 STK4-201ENST00000372801 2038 ntTSL 2 BASIC21.58■■□□□ 1.05
COL4A1P02462 BX323043.1-201ENST00000641006 1765 ntBASIC21.58■■□□□ 1.05
COL4A1P02462 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
COL4A1P02462 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC21.58■■□□□ 1.05
COL4A1P02462 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC21.58■■□□□ 1.05
COL4A1P02462 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
COL4A1P02462 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
COL4A1P02462 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC21.58■■□□□ 1.05
COL4A1P02462 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC21.58■■□□□ 1.05
COL4A1P02462 CFL1-202ENST00000524553 860 ntTSL 2 BASIC21.58■■□□□ 1.05
COL4A1P02462 MIR4469-201ENST00000583919 79 ntBASIC21.58■■□□□ 1.05
COL4A1P02462 MTDHP5-201ENST00000598980 586 ntBASIC21.58■■□□□ 1.05
COL4A1P02462 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC21.58■■□□□ 1.05
COL4A1P02462 AL596442.2-201ENST00000610240 980 ntBASIC21.58■■□□□ 1.05
COL4A1P02462 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
COL4A1P02462 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
COL4A1P02462 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
COL4A1P02462 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
COL4A1P02462 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
COL4A1P02462 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC21.58■■□□□ 1.04
COL4A1P02462 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC21.58■■□□□ 1.04
COL4A1P02462 PC-214ENST00000628663 1470 ntTSL 5 BASIC21.58■■□□□ 1.04
COL4A1P02462 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
COL4A1P02462 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC21.57■■□□□ 1.04
COL4A1P02462 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
COL4A1P02462 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC21.57■■□□□ 1.04
COL4A1P02462 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC21.57■■□□□ 1.04
COL4A1P02462 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
COL4A1P02462 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC21.57■■□□□ 1.04
COL4A1P02462 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC21.57■■□□□ 1.04
COL4A1P02462 PTCHD3P3-201ENST00000403073 906 ntBASIC21.57■■□□□ 1.04
COL4A1P02462 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
COL4A1P02462 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC21.57■■□□□ 1.04
COL4A1P02462 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
COL4A1P02462 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
COL4A1P02462 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC21.57■■□□□ 1.04
COL4A1P02462 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC21.57■■□□□ 1.04
COL4A1P02462 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
COL4A1P02462 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC21.57■■□□□ 1.04
COL4A1P02462 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
COL4A1P02462 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC21.57■■□□□ 1.04
COL4A1P02462 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
COL4A1P02462 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
COL4A1P02462 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
COL4A1P02462 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
COL4A1P02462 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC21.56■■□□□ 1.04
COL4A1P02462 VN2R19P-201ENST00000442399 1052 ntBASIC21.56■■□□□ 1.04
COL4A1P02462 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC21.56■■□□□ 1.04
COL4A1P02462 PUS1-205ENST00000535067 838 ntTSL 3 BASIC21.56■■□□□ 1.04
COL4A1P02462 PDPK2P-202ENST00000562415 1191 ntBASIC21.56■■□□□ 1.04
COL4A1P02462 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC21.56■■□□□ 1.04
COL4A1P02462 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC21.56■■□□□ 1.04
COL4A1P02462 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
COL4A1P02462 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC21.56■■□□□ 1.04
COL4A1P02462 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
COL4A1P02462 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC21.56■■□□□ 1.04
COL4A1P02462 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
COL4A1P02462 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
COL4A1P02462 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC21.56■■□□□ 1.04
COL4A1P02462 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
COL4A1P02462 AC097637.2-201ENST00000624096 1997 ntBASIC21.56■■□□□ 1.04
COL4A1P02462 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
COL4A1P02462 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
COL4A1P02462 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
COL4A1P02462 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
COL4A1P02462 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC21.56■■□□□ 1.04
COL4A1P02462 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC21.56■■□□□ 1.04
COL4A1P02462 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC21.56■■□□□ 1.04
COL4A1P02462 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
COL4A1P02462 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
COL4A1P02462 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC21.56■■□□□ 1.04
COL4A1P02462 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC21.56■■□□□ 1.04
COL4A1P02462 AL590787.1-201ENST00000568856 1315 ntBASIC21.56■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms