Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLPTM1O96005 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLPTM1O96005 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLPTM1O96005 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CLPTM1O96005 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.84■□□□□ 0.29
CLPTM1O96005 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLPTM1O96005 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLPTM1O96005 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLPTM1O96005 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLPTM1O96005 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLPTM1O96005 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CLPTM1O96005 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLPTM1O96005 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLPTM1O96005 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CLPTM1O96005 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC16.84■□□□□ 0.29
CLPTM1O96005 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLPTM1O96005 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLPTM1O96005 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC16.84■□□□□ 0.29
CLPTM1O96005 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLPTM1O96005 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLPTM1O96005 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLPTM1O96005 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
CLPTM1O96005 AC093827.2-201ENST00000512654 315 ntBASIC16.84■□□□□ 0.29
CLPTM1O96005 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLPTM1O96005 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC16.84■□□□□ 0.29
CLPTM1O96005 AC004264.1-201ENST00000608354 794 ntBASIC16.84■□□□□ 0.29
CLPTM1O96005 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CLPTM1O96005 CABP2-204ENST00000636477 941 ntTSL 5 BASIC16.84■□□□□ 0.29
CLPTM1O96005 AP006294.2-201ENST00000641667 209 ntBASIC16.84■□□□□ 0.29
CLPTM1O96005 AC068587.9-201ENST00000641814 219 ntBASIC16.84■□□□□ 0.29
CLPTM1O96005 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.84■□□□□ 0.29
CLPTM1O96005 TSPY26P-202ENST00000565928 3884 ntBASIC16.84■□□□□ 0.29
CLPTM1O96005 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLPTM1O96005 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CLPTM1O96005 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CLPTM1O96005 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLPTM1O96005 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLPTM1O96005 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
CLPTM1O96005 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.84■□□□□ 0.29
CLPTM1O96005 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CLPTM1O96005 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLPTM1O96005 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
CLPTM1O96005 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLPTM1O96005 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLPTM1O96005 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLPTM1O96005 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.84■□□□□ 0.29
CLPTM1O96005 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLPTM1O96005 AC092850.2-201ENST00000623821 2697 ntBASIC16.83■□□□□ 0.29
CLPTM1O96005 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CLPTM1O96005 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
CLPTM1O96005 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
CLPTM1O96005 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CLPTM1O96005 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
CLPTM1O96005 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLPTM1O96005 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLPTM1O96005 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLPTM1O96005 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CLPTM1O96005 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
CLPTM1O96005 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLPTM1O96005 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC16.83■□□□□ 0.28
CLPTM1O96005 KRT16P5-201ENST00000455284 522 ntBASIC16.83■□□□□ 0.28
CLPTM1O96005 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLPTM1O96005 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CLPTM1O96005 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC16.83■□□□□ 0.28
CLPTM1O96005 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC16.83■□□□□ 0.28
CLPTM1O96005 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.83■□□□□ 0.28
CLPTM1O96005 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC16.83■□□□□ 0.28
CLPTM1O96005 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CLPTM1O96005 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLPTM1O96005 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLPTM1O96005 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
CLPTM1O96005 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
CLPTM1O96005 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CLPTM1O96005 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLPTM1O96005 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CLPTM1O96005 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.83■□□□□ 0.28
CLPTM1O96005 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CLPTM1O96005 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.82■□□□□ 0.28
CLPTM1O96005 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLPTM1O96005 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.82■□□□□ 0.28
CLPTM1O96005 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLPTM1O96005 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
CLPTM1O96005 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CLPTM1O96005 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLPTM1O96005 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CLPTM1O96005 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CLPTM1O96005 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CLPTM1O96005 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC16.82■□□□□ 0.28
CLPTM1O96005 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLPTM1O96005 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLPTM1O96005 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLPTM1O96005 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLPTM1O96005 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLPTM1O96005 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
CLPTM1O96005 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC16.82■□□□□ 0.28
CLPTM1O96005 YBX1P10-201ENST00000444752 975 ntBASIC16.82■□□□□ 0.28
CLPTM1O96005 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC16.82■□□□□ 0.28
CLPTM1O96005 AC008550.1-201ENST00000511500 884 ntBASIC16.82■□□□□ 0.28
CLPTM1O96005 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC16.82■□□□□ 0.28
CLPTM1O96005 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms