Protein–RNA interactions for Protein: O95714

HERC2, E3 ubiquitin-protein ligase HERC2, humanhuman

Predictions only

Length 4,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2O95714 AC140658.5-201ENST00000438532 169 ntBASIC10.84□□□□□ -0.67
HERC2O95714 CSF2RBP1-201ENST00000447905 391 ntBASIC10.84□□□□□ -0.67
HERC2O95714 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC10.84□□□□□ -0.67
HERC2O95714 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC10.84□□□□□ -0.67
HERC2O95714 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
HERC2O95714 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC10.84□□□□□ -0.67
HERC2O95714 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
HERC2O95714 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC10.84□□□□□ -0.67
HERC2O95714 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
HERC2O95714 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
HERC2O95714 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
HERC2O95714 AGER-203ENST00000375065 665 ntTSL 2 BASIC10.84□□□□□ -0.67
HERC2O95714 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC10.84□□□□□ -0.67
HERC2O95714 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
HERC2O95714 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
HERC2O95714 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
HERC2O95714 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC10.84□□□□□ -0.67
HERC2O95714 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
HERC2O95714 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC10.84□□□□□ -0.67
HERC2O95714 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
HERC2O95714 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
HERC2O95714 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC10.84□□□□□ -0.67
HERC2O95714 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC10.84□□□□□ -0.67
HERC2O95714 HLA-V-204ENST00000476601 1289 ntBASIC10.84□□□□□ -0.67
HERC2O95714 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC10.84□□□□□ -0.67
HERC2O95714 HCG18-245ENST00000602550 559 ntTSL 4 BASIC10.84□□□□□ -0.67
HERC2O95714 RAB34-223ENST00000636154 730 ntTSL 2 BASIC10.84□□□□□ -0.67
HERC2O95714 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
HERC2O95714 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
HERC2O95714 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC10.84□□□□□ -0.67
HERC2O95714 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
HERC2O95714 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC10.84□□□□□ -0.67
HERC2O95714 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC10.84□□□□□ -0.67
HERC2O95714 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
HERC2O95714 AC011495.1-201ENST00000498085 584 ntBASIC10.84□□□□□ -0.67
HERC2O95714 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC10.84□□□□□ -0.67
HERC2O95714 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC10.84□□□□□ -0.67
HERC2O95714 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
HERC2O95714 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC10.84□□□□□ -0.67
HERC2O95714 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
HERC2O95714 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
HERC2O95714 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC10.83□□□□□ -0.67
HERC2O95714 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC10.83□□□□□ -0.67
HERC2O95714 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.67
HERC2O95714 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC10.83□□□□□ -0.68
HERC2O95714 CD7-202ENST00000578509 925 ntTSL 3 BASIC10.83□□□□□ -0.68
HERC2O95714 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC10.83□□□□□ -0.68
HERC2O95714 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
HERC2O95714 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
HERC2O95714 AC018665.1-201ENST00000622927 1362 ntBASIC10.83□□□□□ -0.68
HERC2O95714 AL049757.1-201ENST00000616842 1596 ntBASIC10.83□□□□□ -0.68
HERC2O95714 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC10.83□□□□□ -0.68
HERC2O95714 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
HERC2O95714 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC10.83□□□□□ -0.68
HERC2O95714 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC10.83□□□□□ -0.68
HERC2O95714 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC10.83□□□□□ -0.68
HERC2O95714 GGTLC5P-201ENST00000617623 998 ntBASIC10.83□□□□□ -0.68
HERC2O95714 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
HERC2O95714 ME2-208ENST00000638937 2471 ntTSL 5 BASIC10.83□□□□□ -0.68
HERC2O95714 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
HERC2O95714 SPDYE18-201ENST00000510091 1050 ntBASIC10.83□□□□□ -0.68
HERC2O95714 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC10.83□□□□□ -0.68
HERC2O95714 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
HERC2O95714 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC10.83□□□□□ -0.68
HERC2O95714 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
HERC2O95714 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
HERC2O95714 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC10.83□□□□□ -0.68
HERC2O95714 SIRPAP1-201ENST00000448467 1770 ntBASIC10.83□□□□□ -0.68
HERC2O95714 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
HERC2O95714 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
HERC2O95714 UROS-202ENST00000368778 1556 ntTSL 2 BASIC10.83□□□□□ -0.68
HERC2O95714 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
HERC2O95714 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
HERC2O95714 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC10.83□□□□□ -0.68
HERC2O95714 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC10.83□□□□□ -0.68
HERC2O95714 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
HERC2O95714 DERL2-202ENST00000570848 657 ntTSL 5 BASIC10.83□□□□□ -0.68
HERC2O95714 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
HERC2O95714 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
HERC2O95714 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC10.83□□□□□ -0.68
HERC2O95714 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC10.83□□□□□ -0.68
HERC2O95714 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
HERC2O95714 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
HERC2O95714 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
HERC2O95714 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
HERC2O95714 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
HERC2O95714 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
HERC2O95714 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
HERC2O95714 AL024508.2-201ENST00000607749 1894 ntBASIC10.82□□□□□ -0.68
HERC2O95714 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
HERC2O95714 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC10.82□□□□□ -0.68
HERC2O95714 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
HERC2O95714 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC10.82□□□□□ -0.68
HERC2O95714 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC10.82□□□□□ -0.68
HERC2O95714 AP003419.4-201ENST00000616071 517 ntBASIC10.82□□□□□ -0.68
HERC2O95714 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
HERC2O95714 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
HERC2O95714 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
HERC2O95714 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC10.82□□□□□ -0.68
HERC2O95714 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms