Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC14.92□□□□□ -0.02
SIX6O95475 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC14.92□□□□□ -0.02
SIX6O95475 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
SIX6O95475 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC14.92□□□□□ -0.02
SIX6O95475 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SIX6O95475 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SIX6O95475 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SIX6O95475 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SIX6O95475 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
SIX6O95475 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SIX6O95475 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC14.91□□□□□ -0.02
SIX6O95475 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
SIX6O95475 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
SIX6O95475 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
SIX6O95475 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SIX6O95475 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SIX6O95475 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC14.91□□□□□ -0.02
SIX6O95475 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
SIX6O95475 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SIX6O95475 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SIX6O95475 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC14.91□□□□□ -0.02
SIX6O95475 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SIX6O95475 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SIX6O95475 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SIX6O95475 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SIX6O95475 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
SIX6O95475 Z85996.1-201ENST00000494644 937 ntBASIC14.91□□□□□ -0.02
SIX6O95475 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
SIX6O95475 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC14.91□□□□□ -0.02
SIX6O95475 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SIX6O95475 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SIX6O95475 C1QL1P1-201ENST00000568105 661 ntBASIC14.91□□□□□ -0.02
SIX6O95475 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC14.91□□□□□ -0.02
SIX6O95475 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC14.91□□□□□ -0.02
SIX6O95475 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SIX6O95475 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC14.91□□□□□ -0.02
SIX6O95475 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SIX6O95475 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC14.91□□□□□ -0.02
SIX6O95475 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SIX6O95475 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
SIX6O95475 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SIX6O95475 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SIX6O95475 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
SIX6O95475 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SIX6O95475 KRT8P50-201ENST00000562022 1438 ntBASIC14.91□□□□□ -0.02
SIX6O95475 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SIX6O95475 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC14.9□□□□□ -0.02
SIX6O95475 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SIX6O95475 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SIX6O95475 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SIX6O95475 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC14.9□□□□□ -0.02
SIX6O95475 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
SIX6O95475 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SIX6O95475 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
SIX6O95475 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SIX6O95475 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC14.9□□□□□ -0.02
SIX6O95475 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
SIX6O95475 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SIX6O95475 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SIX6O95475 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
SIX6O95475 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SIX6O95475 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC14.9□□□□□ -0.02
SIX6O95475 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SIX6O95475 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC14.9□□□□□ -0.02
SIX6O95475 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SIX6O95475 ABHD17AP6-201ENST00000458502 1044 ntBASIC14.9□□□□□ -0.02
SIX6O95475 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SIX6O95475 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC14.9□□□□□ -0.02
SIX6O95475 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC14.9□□□□□ -0.02
SIX6O95475 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC14.9□□□□□ -0.02
SIX6O95475 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
SIX6O95475 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
SIX6O95475 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC14.9□□□□□ -0.02
SIX6O95475 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
SIX6O95475 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
SIX6O95475 AL662844.4-201ENST00000606367 2838 ntBASIC14.9□□□□□ -0.02
SIX6O95475 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SIX6O95475 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
SIX6O95475 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SIX6O95475 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
SIX6O95475 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC14.9□□□□□ -0.02
SIX6O95475 UROS-202ENST00000368778 1556 ntTSL 2 BASIC14.9□□□□□ -0.02
SIX6O95475 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SIX6O95475 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SIX6O95475 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SIX6O95475 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
SIX6O95475 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC14.89□□□□□ -0.03
SIX6O95475 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC14.89□□□□□ -0.03
SIX6O95475 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SIX6O95475 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SIX6O95475 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SIX6O95475 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC14.89□□□□□ -0.03
SIX6O95475 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
SIX6O95475 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.89□□□□□ -0.03
SIX6O95475 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SIX6O95475 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SIX6O95475 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC14.89□□□□□ -0.03
SIX6O95475 AC120498.8-201ENST00000614275 531 ntBASIC14.89□□□□□ -0.03
SIX6O95475 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SIX6O95475 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms