Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 DKFZP434A062-201ENST00000573103 5021 ntBASIC15.9■□□□□ 0.14
PFDN1O60925 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
PFDN1O60925 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PFDN1O60925 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC15.9■□□□□ 0.14
PFDN1O60925 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PFDN1O60925 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
PFDN1O60925 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
PFDN1O60925 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC15.9■□□□□ 0.14
PFDN1O60925 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.9■□□□□ 0.14
PFDN1O60925 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC15.9■□□□□ 0.14
PFDN1O60925 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PFDN1O60925 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PFDN1O60925 TSPY13P-201ENST00000338964 914 ntBASIC15.9■□□□□ 0.14
PFDN1O60925 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
PFDN1O60925 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PFDN1O60925 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC15.9■□□□□ 0.14
PFDN1O60925 ABHD17AP5-201ENST00000580133 923 ntBASIC15.9■□□□□ 0.14
PFDN1O60925 MYC-208ENST00000641036 567 ntBASIC15.9■□□□□ 0.14
PFDN1O60925 KRT8P33-201ENST00000508125 1423 ntBASIC15.9■□□□□ 0.14
PFDN1O60925 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC15.9■□□□□ 0.14
PFDN1O60925 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.9■□□□□ 0.14
PFDN1O60925 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PFDN1O60925 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
PFDN1O60925 KCP-203ENST00000610776 5108 ntTSL 5 BASIC15.9■□□□□ 0.14
PFDN1O60925 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
PFDN1O60925 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PFDN1O60925 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PFDN1O60925 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PFDN1O60925 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
PFDN1O60925 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
PFDN1O60925 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PFDN1O60925 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
PFDN1O60925 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PFDN1O60925 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
PFDN1O60925 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PFDN1O60925 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
PFDN1O60925 AC126335.2-201ENST00000623362 4637 ntBASIC15.89■□□□□ 0.13
PFDN1O60925 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PFDN1O60925 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PFDN1O60925 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC15.89■□□□□ 0.13
PFDN1O60925 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15.89■□□□□ 0.13
PFDN1O60925 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
PFDN1O60925 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
PFDN1O60925 KRT8P20-201ENST00000423953 1409 ntBASIC15.89■□□□□ 0.13
PFDN1O60925 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.89■□□□□ 0.13
PFDN1O60925 AC103834.1-201ENST00000520383 144 ntBASIC15.89■□□□□ 0.13
PFDN1O60925 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC15.89■□□□□ 0.13
PFDN1O60925 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC15.89■□□□□ 0.13
PFDN1O60925 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.89■□□□□ 0.13
PFDN1O60925 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC15.89■□□□□ 0.13
PFDN1O60925 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
PFDN1O60925 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
PFDN1O60925 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
PFDN1O60925 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.89■□□□□ 0.13
PFDN1O60925 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PFDN1O60925 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PFDN1O60925 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PFDN1O60925 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PFDN1O60925 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.89■□□□□ 0.13
PFDN1O60925 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
PFDN1O60925 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PFDN1O60925 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PFDN1O60925 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PFDN1O60925 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PFDN1O60925 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
PFDN1O60925 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
PFDN1O60925 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC15.88■□□□□ 0.13
PFDN1O60925 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC15.88■□□□□ 0.13
PFDN1O60925 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC15.88■□□□□ 0.13
PFDN1O60925 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PFDN1O60925 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
PFDN1O60925 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
PFDN1O60925 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.88■□□□□ 0.13
PFDN1O60925 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PFDN1O60925 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC15.88■□□□□ 0.13
PFDN1O60925 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC15.88■□□□□ 0.13
PFDN1O60925 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
PFDN1O60925 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC15.88■□□□□ 0.13
PFDN1O60925 KRT125P-201ENST00000546827 989 ntBASIC15.88■□□□□ 0.13
PFDN1O60925 AC008175.2-201ENST00000612840 297 ntBASIC15.88■□□□□ 0.13
PFDN1O60925 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PFDN1O60925 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PFDN1O60925 AC005224.4-201ENST00000583262 1652 ntBASIC15.88■□□□□ 0.13
PFDN1O60925 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
PFDN1O60925 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PFDN1O60925 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PFDN1O60925 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC15.88■□□□□ 0.13
PFDN1O60925 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC15.88■□□□□ 0.13
PFDN1O60925 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
PFDN1O60925 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
PFDN1O60925 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
PFDN1O60925 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC15.88■□□□□ 0.13
PFDN1O60925 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PFDN1O60925 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PFDN1O60925 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PFDN1O60925 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
PFDN1O60925 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PFDN1O60925 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PFDN1O60925 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC15.87■□□□□ 0.13
PFDN1O60925 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms