Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM13O60858 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM13O60858 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.54■□□□□ 0.4
TRIM13O60858 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.54■□□□□ 0.4
TRIM13O60858 AC009947.2-201ENST00000444014 672 ntBASIC17.54■□□□□ 0.4
TRIM13O60858 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
TRIM13O60858 MIR4785-201ENST00000585005 73 ntBASIC17.54■□□□□ 0.4
TRIM13O60858 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.54■□□□□ 0.4
TRIM13O60858 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
TRIM13O60858 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.54■□□□□ 0.4
TRIM13O60858 AC092865.7-201ENST00000641832 219 ntBASIC17.54■□□□□ 0.4
TRIM13O60858 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
TRIM13O60858 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
TRIM13O60858 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
TRIM13O60858 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.54■□□□□ 0.4
TRIM13O60858 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM13O60858 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
TRIM13O60858 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM13O60858 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM13O60858 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.54■□□□□ 0.4
TRIM13O60858 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
TRIM13O60858 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM13O60858 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM13O60858 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM13O60858 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM13O60858 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
TRIM13O60858 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
TRIM13O60858 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM13O60858 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.53■□□□□ 0.4
TRIM13O60858 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM13O60858 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM13O60858 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
TRIM13O60858 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
TRIM13O60858 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.53■□□□□ 0.4
TRIM13O60858 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.53■□□□□ 0.4
TRIM13O60858 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM13O60858 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.53■□□□□ 0.4
TRIM13O60858 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM13O60858 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
TRIM13O60858 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM13O60858 PVRIG2P-201ENST00000435460 978 ntBASIC17.53■□□□□ 0.4
TRIM13O60858 DDX43P3-201ENST00000441064 443 ntBASIC17.53■□□□□ 0.4
TRIM13O60858 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.53■□□□□ 0.4
TRIM13O60858 EGLN1P1-201ENST00000531623 762 ntBASIC17.53■□□□□ 0.4
TRIM13O60858 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM13O60858 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.53■□□□□ 0.4
TRIM13O60858 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM13O60858 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.53■□□□□ 0.4
TRIM13O60858 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM13O60858 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.53■□□□□ 0.4
TRIM13O60858 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
TRIM13O60858 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM13O60858 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM13O60858 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM13O60858 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM13O60858 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.53■□□□□ 0.4
TRIM13O60858 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.52■□□□□ 0.4
TRIM13O60858 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
TRIM13O60858 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.52■□□□□ 0.4
TRIM13O60858 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM13O60858 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.52■□□□□ 0.4
TRIM13O60858 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
TRIM13O60858 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
TRIM13O60858 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.52■□□□□ 0.4
TRIM13O60858 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.52■□□□□ 0.4
TRIM13O60858 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
TRIM13O60858 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM13O60858 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.52■□□□□ 0.4
TRIM13O60858 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM13O60858 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
TRIM13O60858 TSPY7P-201ENST00000431358 1114 ntBASIC17.52■□□□□ 0.4
TRIM13O60858 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.52■□□□□ 0.4
TRIM13O60858 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM13O60858 AC128688.1-201ENST00000487626 519 ntBASIC17.52■□□□□ 0.4
TRIM13O60858 AC113404.2-201ENST00000507884 177 ntBASIC17.52■□□□□ 0.4
TRIM13O60858 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.52■□□□□ 0.4
TRIM13O60858 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.52■□□□□ 0.4
TRIM13O60858 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.52■□□□□ 0.4
TRIM13O60858 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.52■□□□□ 0.4
TRIM13O60858 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM13O60858 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM13O60858 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TRIM13O60858 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRIM13O60858 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRIM13O60858 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.39
TRIM13O60858 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.52■□□□□ 0.39
TRIM13O60858 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRIM13O60858 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRIM13O60858 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TRIM13O60858 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
TRIM13O60858 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
TRIM13O60858 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
TRIM13O60858 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.51■□□□□ 0.39
TRIM13O60858 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.51■□□□□ 0.39
TRIM13O60858 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM13O60858 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
TRIM13O60858 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM13O60858 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.51■□□□□ 0.39
TRIM13O60858 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM13O60858 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms