Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
PRAMEF11O60813 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
PRAMEF11O60813 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PRAMEF11O60813 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PRAMEF11O60813 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.03■□□□□ 0.48
PRAMEF11O60813 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.03■□□□□ 0.48
PRAMEF11O60813 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.03■□□□□ 0.48
PRAMEF11O60813 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PRAMEF11O60813 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18.03■□□□□ 0.48
PRAMEF11O60813 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC18.03■□□□□ 0.48
PRAMEF11O60813 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.03■□□□□ 0.48
PRAMEF11O60813 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.03■□□□□ 0.48
PRAMEF11O60813 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC18.03■□□□□ 0.48
PRAMEF11O60813 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.03■□□□□ 0.48
PRAMEF11O60813 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PRAMEF11O60813 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.03■□□□□ 0.48
PRAMEF11O60813 AL121772.3-201ENST00000610840 674 ntBASIC18.03■□□□□ 0.48
PRAMEF11O60813 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.03■□□□□ 0.48
PRAMEF11O60813 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.03■□□□□ 0.48
PRAMEF11O60813 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.03■□□□□ 0.48
PRAMEF11O60813 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.03■□□□□ 0.48
PRAMEF11O60813 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
PRAMEF11O60813 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PRAMEF11O60813 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
PRAMEF11O60813 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
PRAMEF11O60813 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
PRAMEF11O60813 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
PRAMEF11O60813 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
PRAMEF11O60813 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.02■□□□□ 0.48
PRAMEF11O60813 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
PRAMEF11O60813 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.02■□□□□ 0.48
PRAMEF11O60813 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PRAMEF11O60813 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PRAMEF11O60813 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.02■□□□□ 0.48
PRAMEF11O60813 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
PRAMEF11O60813 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PRAMEF11O60813 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PRAMEF11O60813 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
PRAMEF11O60813 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PRAMEF11O60813 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
PRAMEF11O60813 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PRAMEF11O60813 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
PRAMEF11O60813 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
PRAMEF11O60813 AC005104.2-201ENST00000427818 678 ntBASIC18.02■□□□□ 0.48
PRAMEF11O60813 DUSP5P1-201ENST00000441325 1139 ntBASIC18.02■□□□□ 0.48
PRAMEF11O60813 KRT18P31-201ENST00000506277 1292 ntBASIC18.02■□□□□ 0.48
PRAMEF11O60813 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.02■□□□□ 0.48
PRAMEF11O60813 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.02■□□□□ 0.48
PRAMEF11O60813 TBCB-205ENST00000585746 875 ntTSL 3 BASIC18.02■□□□□ 0.48
PRAMEF11O60813 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.02■□□□□ 0.48
PRAMEF11O60813 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.02■□□□□ 0.48
PRAMEF11O60813 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC18.02■□□□□ 0.48
PRAMEF11O60813 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PRAMEF11O60813 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
PRAMEF11O60813 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
PRAMEF11O60813 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.02■□□□□ 0.47
PRAMEF11O60813 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.02■□□□□ 0.47
PRAMEF11O60813 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PRAMEF11O60813 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PRAMEF11O60813 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
PRAMEF11O60813 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
PRAMEF11O60813 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PRAMEF11O60813 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PRAMEF11O60813 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
PRAMEF11O60813 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PRAMEF11O60813 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PRAMEF11O60813 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PRAMEF11O60813 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.01■□□□□ 0.47
PRAMEF11O60813 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PRAMEF11O60813 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PRAMEF11O60813 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PRAMEF11O60813 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.01■□□□□ 0.47
PRAMEF11O60813 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PRAMEF11O60813 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.01■□□□□ 0.47
PRAMEF11O60813 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.01■□□□□ 0.47
PRAMEF11O60813 AL591684.3-201ENST00000605187 298 ntBASIC18.01■□□□□ 0.47
PRAMEF11O60813 LINC01451-201ENST00000623792 534 ntBASIC18.01■□□□□ 0.47
PRAMEF11O60813 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PRAMEF11O60813 AC067852.2-201ENST00000590513 2313 ntBASIC18.01■□□□□ 0.47
PRAMEF11O60813 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.01■□□□□ 0.47
PRAMEF11O60813 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PRAMEF11O60813 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PRAMEF11O60813 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PRAMEF11O60813 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
PRAMEF11O60813 LINC00304-203ENST00000565008 1864 ntBASIC18.01■□□□□ 0.47
PRAMEF11O60813 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PRAMEF11O60813 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PRAMEF11O60813 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
PRAMEF11O60813 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PRAMEF11O60813 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
PRAMEF11O60813 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PRAMEF11O60813 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
PRAMEF11O60813 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
PRAMEF11O60813 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PRAMEF11O60813 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
PRAMEF11O60813 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18■□□□□ 0.47
PRAMEF11O60813 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18■□□□□ 0.47
PRAMEF11O60813 SIRPAP1-201ENST00000448467 1770 ntBASIC18■□□□□ 0.47
PRAMEF11O60813 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PRAMEF11O60813 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms