Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNX3O60493 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNX3O60493 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SNX3O60493 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
SNX3O60493 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.54■□□□□ 0.4
SNX3O60493 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.54■□□□□ 0.4
SNX3O60493 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
SNX3O60493 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
SNX3O60493 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNX3O60493 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.53■□□□□ 0.4
SNX3O60493 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.53■□□□□ 0.4
SNX3O60493 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SNX3O60493 RNF216P1-203ENST00000404404 2427 ntBASIC17.53■□□□□ 0.4
SNX3O60493 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SNX3O60493 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SNX3O60493 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC17.53■□□□□ 0.4
SNX3O60493 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SNX3O60493 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
SNX3O60493 AC092171.3-201ENST00000610122 2651 ntBASIC17.53■□□□□ 0.4
SNX3O60493 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SNX3O60493 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SNX3O60493 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.53■□□□□ 0.4
SNX3O60493 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
SNX3O60493 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SNX3O60493 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
SNX3O60493 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC17.53■□□□□ 0.4
SNX3O60493 NIFKP9-201ENST00000419265 221 ntBASIC17.53■□□□□ 0.4
SNX3O60493 CDCA4P2-201ENST00000441182 718 ntBASIC17.53■□□□□ 0.4
SNX3O60493 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.53■□□□□ 0.4
SNX3O60493 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SNX3O60493 KRT16P5-201ENST00000455284 522 ntBASIC17.53■□□□□ 0.4
SNX3O60493 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.53■□□□□ 0.4
SNX3O60493 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.53■□□□□ 0.4
SNX3O60493 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SNX3O60493 AC080038.1-201ENST00000611274 1154 ntBASIC17.53■□□□□ 0.4
SNX3O60493 AC011298.2-201ENST00000617989 482 ntBASIC17.53■□□□□ 0.4
SNX3O60493 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.53■□□□□ 0.4
SNX3O60493 AC009949.1-201ENST00000623048 1830 ntBASIC17.53■□□□□ 0.4
SNX3O60493 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SNX3O60493 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
SNX3O60493 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.53■□□□□ 0.4
SNX3O60493 HOXB1-202ENST00000577092 1414 ntBASIC17.53■□□□□ 0.4
SNX3O60493 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SNX3O60493 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
SNX3O60493 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.53■□□□□ 0.4
SNX3O60493 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.53■□□□□ 0.4
SNX3O60493 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SNX3O60493 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SNX3O60493 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC17.53■□□□□ 0.4
SNX3O60493 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
SNX3O60493 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SNX3O60493 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
SNX3O60493 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
SNX3O60493 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC17.52■□□□□ 0.4
SNX3O60493 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
SNX3O60493 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SNX3O60493 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SNX3O60493 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SNX3O60493 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
SNX3O60493 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
SNX3O60493 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.52■□□□□ 0.4
SNX3O60493 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
SNX3O60493 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SNX3O60493 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SNX3O60493 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.52■□□□□ 0.4
SNX3O60493 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SNX3O60493 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SNX3O60493 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SNX3O60493 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.52■□□□□ 0.4
SNX3O60493 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.52■□□□□ 0.4
SNX3O60493 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.52■□□□□ 0.4
SNX3O60493 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.52■□□□□ 0.4
SNX3O60493 MIR3180-5-201ENST00000583743 153 ntBASIC17.52■□□□□ 0.4
SNX3O60493 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.52■□□□□ 0.4
SNX3O60493 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.52■□□□□ 0.4
SNX3O60493 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC17.52■□□□□ 0.4
SNX3O60493 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SNX3O60493 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SNX3O60493 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.52■□□□□ 0.4
SNX3O60493 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SNX3O60493 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.52■□□□□ 0.4
SNX3O60493 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
SNX3O60493 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
SNX3O60493 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
SNX3O60493 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
SNX3O60493 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.52■□□□□ 0.39
SNX3O60493 AL513523.2-202ENST00000427283 2040 ntBASIC17.52■□□□□ 0.39
SNX3O60493 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SNX3O60493 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SNX3O60493 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SNX3O60493 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SNX3O60493 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
SNX3O60493 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SNX3O60493 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.51■□□□□ 0.39
SNX3O60493 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SNX3O60493 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.51■□□□□ 0.39
SNX3O60493 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SNX3O60493 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SNX3O60493 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC17.51■□□□□ 0.39
SNX3O60493 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms