Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC21.2■□□□□ 0.98
FOXN1O15353 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC21.2■□□□□ 0.98
FOXN1O15353 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
FOXN1O15353 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
FOXN1O15353 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
FOXN1O15353 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
FOXN1O15353 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
FOXN1O15353 MKNK2P1-201ENST00000437526 628 ntBASIC21.2■□□□□ 0.98
FOXN1O15353 ABCD1P5-201ENST00000445663 754 ntBASIC21.2■□□□□ 0.98
FOXN1O15353 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC21.2■□□□□ 0.98
FOXN1O15353 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC21.2■□□□□ 0.98
FOXN1O15353 AC004449.1-201ENST00000564240 433 ntBASIC21.2■□□□□ 0.98
FOXN1O15353 MTDHP4-201ENST00000600287 670 ntBASIC21.2■□□□□ 0.98
FOXN1O15353 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC21.2■□□□□ 0.98
FOXN1O15353 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC21.2■□□□□ 0.98
FOXN1O15353 HEIH-201ENST00000623091 1652 ntBASIC21.2■□□□□ 0.98
FOXN1O15353 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
FOXN1O15353 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
FOXN1O15353 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
FOXN1O15353 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
FOXN1O15353 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
FOXN1O15353 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
FOXN1O15353 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
FOXN1O15353 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
FOXN1O15353 AC112777.1-201ENST00000540175 1423 ntBASIC21.2■□□□□ 0.98
FOXN1O15353 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC21.2■□□□□ 0.98
FOXN1O15353 AC018470.1-201ENST00000624790 3129 ntBASIC21.2■□□□□ 0.98
FOXN1O15353 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC21.19■□□□□ 0.98
FOXN1O15353 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
FOXN1O15353 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
FOXN1O15353 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
FOXN1O15353 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
FOXN1O15353 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC21.19■□□□□ 0.98
FOXN1O15353 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC21.19■□□□□ 0.98
FOXN1O15353 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
FOXN1O15353 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
FOXN1O15353 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
FOXN1O15353 FUOM-202ENST00000368551 628 ntTSL 3 BASIC21.19■□□□□ 0.98
FOXN1O15353 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
FOXN1O15353 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC21.19■□□□□ 0.98
FOXN1O15353 AL513190.1-201ENST00000621254 727 ntBASIC21.19■□□□□ 0.98
FOXN1O15353 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
FOXN1O15353 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
FOXN1O15353 AC097374.2-201ENST00000618617 1306 ntBASIC21.19■□□□□ 0.98
FOXN1O15353 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
FOXN1O15353 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
FOXN1O15353 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
FOXN1O15353 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
FOXN1O15353 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
FOXN1O15353 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
FOXN1O15353 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC21.19■□□□□ 0.98
FOXN1O15353 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC21.19■□□□□ 0.98
FOXN1O15353 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
FOXN1O15353 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC21.18■□□□□ 0.98
FOXN1O15353 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
FOXN1O15353 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC21.18■□□□□ 0.98
FOXN1O15353 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
FOXN1O15353 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC21.18■□□□□ 0.98
FOXN1O15353 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
FOXN1O15353 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
FOXN1O15353 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
FOXN1O15353 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
FOXN1O15353 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC21.18■□□□□ 0.98
FOXN1O15353 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
FOXN1O15353 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC21.18■□□□□ 0.98
FOXN1O15353 MRPL20P1-201ENST00000400819 433 ntBASIC21.18■□□□□ 0.98
FOXN1O15353 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC21.18■□□□□ 0.98
FOXN1O15353 SIGLEC30P-201ENST00000455569 941 ntBASIC21.18■□□□□ 0.98
FOXN1O15353 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC21.18■□□□□ 0.98
FOXN1O15353 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
FOXN1O15353 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC21.18■□□□□ 0.98
FOXN1O15353 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC21.18■□□□□ 0.98
FOXN1O15353 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC21.18■□□□□ 0.98
FOXN1O15353 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
FOXN1O15353 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC21.18■□□□□ 0.98
FOXN1O15353 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
FOXN1O15353 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC21.18■□□□□ 0.98
FOXN1O15353 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC21.18■□□□□ 0.98
FOXN1O15353 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
FOXN1O15353 MTMR9LP-203ENST00000426597 1545 ntBASIC21.18■□□□□ 0.98
FOXN1O15353 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
FOXN1O15353 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
FOXN1O15353 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC21.17■□□□□ 0.98
FOXN1O15353 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
FOXN1O15353 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
FOXN1O15353 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC21.17■□□□□ 0.98
FOXN1O15353 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC21.17■□□□□ 0.98
FOXN1O15353 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
FOXN1O15353 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
FOXN1O15353 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
FOXN1O15353 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
FOXN1O15353 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC21.17■□□□□ 0.98
FOXN1O15353 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
FOXN1O15353 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
FOXN1O15353 EDF1-203ENST00000371649 790 ntTSL 2 BASIC21.17■□□□□ 0.98
FOXN1O15353 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
FOXN1O15353 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC21.17■□□□□ 0.98
FOXN1O15353 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
FOXN1O15353 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC21.17■□□□□ 0.98
FOXN1O15353 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms