Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATP2A1O14983 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATP2A1O14983 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATP2A1O14983 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
ATP2A1O14983 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC20.3■□□□□ 0.84
ATP2A1O14983 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATP2A1O14983 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ATP2A1O14983 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
ATP2A1O14983 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATP2A1O14983 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATP2A1O14983 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC20.3■□□□□ 0.84
ATP2A1O14983 IMP4-203ENST00000409935 958 ntTSL 5 BASIC20.3■□□□□ 0.84
ATP2A1O14983 BX842568.4-201ENST00000421222 227 ntBASIC20.3■□□□□ 0.84
ATP2A1O14983 AL020989.1-201ENST00000422979 469 ntBASIC20.3■□□□□ 0.84
ATP2A1O14983 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC20.3■□□□□ 0.84
ATP2A1O14983 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
ATP2A1O14983 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC20.3■□□□□ 0.84
ATP2A1O14983 AL356488.2-201ENST00000602755 427 ntBASIC20.3■□□□□ 0.84
ATP2A1O14983 AL589182.2-201ENST00000619332 1049 ntBASIC20.3■□□□□ 0.84
ATP2A1O14983 PGM5P2-202ENST00000637225 1043 ntBASIC20.3■□□□□ 0.84
ATP2A1O14983 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATP2A1O14983 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
ATP2A1O14983 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATP2A1O14983 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATP2A1O14983 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATP2A1O14983 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ATP2A1O14983 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ATP2A1O14983 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATP2A1O14983 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATP2A1O14983 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ATP2A1O14983 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ATP2A1O14983 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ATP2A1O14983 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ATP2A1O14983 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATP2A1O14983 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATP2A1O14983 AC132938.5-201ENST00000624980 1813 ntBASIC20.3■□□□□ 0.84
ATP2A1O14983 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ATP2A1O14983 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.29■□□□□ 0.84
ATP2A1O14983 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC20.29■□□□□ 0.84
ATP2A1O14983 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ATP2A1O14983 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
ATP2A1O14983 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ATP2A1O14983 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ATP2A1O14983 AC004817.3-201ENST00000602957 2129 ntBASIC20.29■□□□□ 0.84
ATP2A1O14983 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ATP2A1O14983 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC20.29■□□□□ 0.84
ATP2A1O14983 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC20.29■□□□□ 0.84
ATP2A1O14983 MIR940-201ENST00000401276 94 ntBASIC20.29■□□□□ 0.84
ATP2A1O14983 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC20.29■□□□□ 0.84
ATP2A1O14983 MED15P5-201ENST00000423150 992 ntBASIC20.29■□□□□ 0.84
ATP2A1O14983 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC20.29■□□□□ 0.84
ATP2A1O14983 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC20.29■□□□□ 0.84
ATP2A1O14983 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC20.29■□□□□ 0.84
ATP2A1O14983 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC20.29■□□□□ 0.84
ATP2A1O14983 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC20.29■□□□□ 0.84
ATP2A1O14983 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC20.29■□□□□ 0.84
ATP2A1O14983 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
ATP2A1O14983 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ATP2A1O14983 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ATP2A1O14983 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ATP2A1O14983 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ATP2A1O14983 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
ATP2A1O14983 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ATP2A1O14983 SIRPAP1-201ENST00000448467 1770 ntBASIC20.29■□□□□ 0.84
ATP2A1O14983 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ATP2A1O14983 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATP2A1O14983 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC20.28■□□□□ 0.84
ATP2A1O14983 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATP2A1O14983 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATP2A1O14983 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ATP2A1O14983 AC009947.1-201ENST00000444350 727 ntBASIC20.28■□□□□ 0.84
ATP2A1O14983 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ATP2A1O14983 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
ATP2A1O14983 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC20.28■□□□□ 0.84
ATP2A1O14983 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
ATP2A1O14983 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
ATP2A1O14983 SDCCAG3P1-201ENST00000589292 1150 ntBASIC20.28■□□□□ 0.84
ATP2A1O14983 AC019129.2-201ENST00000609837 1235 ntBASIC20.28■□□□□ 0.84
ATP2A1O14983 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ATP2A1O14983 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC20.28■□□□□ 0.84
ATP2A1O14983 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ATP2A1O14983 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATP2A1O14983 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
ATP2A1O14983 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
ATP2A1O14983 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATP2A1O14983 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
ATP2A1O14983 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ATP2A1O14983 TNXA-203ENST00000507684 2038 ntBASIC20.27■□□□□ 0.84
ATP2A1O14983 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
ATP2A1O14983 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
ATP2A1O14983 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ATP2A1O14983 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
ATP2A1O14983 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ATP2A1O14983 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC20.27■□□□□ 0.84
ATP2A1O14983 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
ATP2A1O14983 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC20.27■□□□□ 0.84
ATP2A1O14983 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC20.27■□□□□ 0.84
ATP2A1O14983 DDX43P3-201ENST00000441064 443 ntBASIC20.27■□□□□ 0.84
ATP2A1O14983 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC20.27■□□□□ 0.84
ATP2A1O14983 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms