Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 AC092597.1-201ENST00000487352 616 ntBASIC18■□□□□ 0.47
AP3B1O00203 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18■□□□□ 0.47
AP3B1O00203 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18■□□□□ 0.47
AP3B1O00203 LINC01238-205ENST00000567549 1107 ntBASIC18■□□□□ 0.47
AP3B1O00203 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18■□□□□ 0.47
AP3B1O00203 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18■□□□□ 0.47
AP3B1O00203 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
AP3B1O00203 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18■□□□□ 0.47
AP3B1O00203 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
AP3B1O00203 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
AP3B1O00203 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
AP3B1O00203 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18■□□□□ 0.47
AP3B1O00203 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
AP3B1O00203 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
AP3B1O00203 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
AP3B1O00203 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
AP3B1O00203 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
AP3B1O00203 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18■□□□□ 0.47
AP3B1O00203 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18■□□□□ 0.47
AP3B1O00203 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18■□□□□ 0.47
AP3B1O00203 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18■□□□□ 0.47
AP3B1O00203 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18■□□□□ 0.47
AP3B1O00203 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
AP3B1O00203 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
AP3B1O00203 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.99■□□□□ 0.47
AP3B1O00203 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
AP3B1O00203 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.99■□□□□ 0.47
AP3B1O00203 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
AP3B1O00203 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
AP3B1O00203 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.99■□□□□ 0.47
AP3B1O00203 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.99■□□□□ 0.47
AP3B1O00203 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.99■□□□□ 0.47
AP3B1O00203 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
AP3B1O00203 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.99■□□□□ 0.47
AP3B1O00203 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.99■□□□□ 0.47
AP3B1O00203 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
AP3B1O00203 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.99■□□□□ 0.47
AP3B1O00203 LY6E-213ENST00000522528 606 ntTSL 3 BASIC17.99■□□□□ 0.47
AP3B1O00203 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.99■□□□□ 0.47
AP3B1O00203 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.99■□□□□ 0.47
AP3B1O00203 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
AP3B1O00203 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.99■□□□□ 0.47
AP3B1O00203 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.99■□□□□ 0.47
AP3B1O00203 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
AP3B1O00203 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
AP3B1O00203 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
AP3B1O00203 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
AP3B1O00203 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.99■□□□□ 0.47
AP3B1O00203 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
AP3B1O00203 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
AP3B1O00203 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
AP3B1O00203 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
AP3B1O00203 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
AP3B1O00203 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
AP3B1O00203 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.98■□□□□ 0.47
AP3B1O00203 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
AP3B1O00203 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
AP3B1O00203 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
AP3B1O00203 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
AP3B1O00203 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
AP3B1O00203 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.98■□□□□ 0.47
AP3B1O00203 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.98■□□□□ 0.47
AP3B1O00203 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
AP3B1O00203 AC211429.1-201ENST00000415277 523 ntBASIC17.98■□□□□ 0.47
AP3B1O00203 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.98■□□□□ 0.47
AP3B1O00203 MTCL1P1-201ENST00000446207 792 ntBASIC17.98■□□□□ 0.47
AP3B1O00203 AC112907.2-201ENST00000448639 330 ntBASIC17.98■□□□□ 0.47
AP3B1O00203 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.98■□□□□ 0.47
AP3B1O00203 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
AP3B1O00203 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
AP3B1O00203 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
AP3B1O00203 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
AP3B1O00203 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.98■□□□□ 0.47
AP3B1O00203 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
AP3B1O00203 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
AP3B1O00203 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.98■□□□□ 0.47
AP3B1O00203 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
AP3B1O00203 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
AP3B1O00203 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
AP3B1O00203 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
AP3B1O00203 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
AP3B1O00203 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
AP3B1O00203 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
AP3B1O00203 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
AP3B1O00203 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
AP3B1O00203 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
AP3B1O00203 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
AP3B1O00203 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
AP3B1O00203 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
AP3B1O00203 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
AP3B1O00203 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
AP3B1O00203 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
AP3B1O00203 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
AP3B1O00203 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
AP3B1O00203 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
AP3B1O00203 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.97■□□□□ 0.47
AP3B1O00203 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.97■□□□□ 0.47
AP3B1O00203 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
AP3B1O00203 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
AP3B1O00203 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms