Protein–RNA interactions for Protein: A8K830

COLCA2, Colorectal cancer-associated protein 2, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2A8K830 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC13.65□□□□□ -0.22
COLCA2A8K830 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
COLCA2A8K830 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
COLCA2A8K830 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC13.65□□□□□ -0.22
COLCA2A8K830 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
COLCA2A8K830 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
COLCA2A8K830 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
COLCA2A8K830 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC13.65□□□□□ -0.22
COLCA2A8K830 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
COLCA2A8K830 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
COLCA2A8K830 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC13.65□□□□□ -0.22
COLCA2A8K830 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
COLCA2A8K830 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
COLCA2A8K830 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
COLCA2A8K830 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
COLCA2A8K830 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
COLCA2A8K830 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
COLCA2A8K830 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC13.65□□□□□ -0.22
COLCA2A8K830 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC13.65□□□□□ -0.22
COLCA2A8K830 DUX4L2-201ENST00000561772 1275 ntBASIC13.65□□□□□ -0.22
COLCA2A8K830 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
COLCA2A8K830 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC13.65□□□□□ -0.22
COLCA2A8K830 DUX4L6-201ENST00000626483 1275 ntBASIC13.65□□□□□ -0.22
COLCA2A8K830 DUX4L1-201ENST00000627662 1275 ntBASIC13.65□□□□□ -0.22
COLCA2A8K830 DUX4L8-201ENST00000629013 1275 ntBASIC13.65□□□□□ -0.22
COLCA2A8K830 DUX4L3-201ENST00000630187 1275 ntBASIC13.65□□□□□ -0.22
COLCA2A8K830 DUX4L7-201ENST00000630678 1275 ntBASIC13.65□□□□□ -0.22
COLCA2A8K830 DUX4L5-201ENST00000630834 1275 ntBASIC13.65□□□□□ -0.22
COLCA2A8K830 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
COLCA2A8K830 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
COLCA2A8K830 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC13.65□□□□□ -0.22
COLCA2A8K830 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC13.65□□□□□ -0.22
COLCA2A8K830 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
COLCA2A8K830 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
COLCA2A8K830 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
COLCA2A8K830 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC13.65□□□□□ -0.22
COLCA2A8K830 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
COLCA2A8K830 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
COLCA2A8K830 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.23
COLCA2A8K830 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.23
COLCA2A8K830 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC13.65□□□□□ -0.23
COLCA2A8K830 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC13.64□□□□□ -0.23
COLCA2A8K830 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC13.64□□□□□ -0.23
COLCA2A8K830 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC13.64□□□□□ -0.23
COLCA2A8K830 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
COLCA2A8K830 GRK6P1-201ENST00000400595 1711 ntBASIC13.64□□□□□ -0.23
COLCA2A8K830 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
COLCA2A8K830 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
COLCA2A8K830 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
COLCA2A8K830 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
COLCA2A8K830 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
COLCA2A8K830 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC13.64□□□□□ -0.23
COLCA2A8K830 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
COLCA2A8K830 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC13.64□□□□□ -0.23
COLCA2A8K830 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
COLCA2A8K830 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
COLCA2A8K830 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
COLCA2A8K830 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
COLCA2A8K830 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
COLCA2A8K830 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
COLCA2A8K830 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
COLCA2A8K830 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC13.64□□□□□ -0.23
COLCA2A8K830 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
COLCA2A8K830 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
COLCA2A8K830 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
COLCA2A8K830 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
COLCA2A8K830 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
COLCA2A8K830 AC079140.4-201ENST00000507448 529 ntBASIC13.64□□□□□ -0.23
COLCA2A8K830 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC13.64□□□□□ -0.23
COLCA2A8K830 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC13.64□□□□□ -0.23
COLCA2A8K830 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
COLCA2A8K830 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
COLCA2A8K830 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC13.64□□□□□ -0.23
COLCA2A8K830 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC13.64□□□□□ -0.23
COLCA2A8K830 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC13.64□□□□□ -0.23
COLCA2A8K830 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
COLCA2A8K830 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC13.64□□□□□ -0.23
COLCA2A8K830 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
COLCA2A8K830 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC13.64□□□□□ -0.23
COLCA2A8K830 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
COLCA2A8K830 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
COLCA2A8K830 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
COLCA2A8K830 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
COLCA2A8K830 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
COLCA2A8K830 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC13.64□□□□□ -0.23
COLCA2A8K830 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC13.64□□□□□ -0.23
COLCA2A8K830 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
COLCA2A8K830 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
COLCA2A8K830 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC13.64□□□□□ -0.23
COLCA2A8K830 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
COLCA2A8K830 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
COLCA2A8K830 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC13.63□□□□□ -0.23
COLCA2A8K830 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC13.63□□□□□ -0.23
COLCA2A8K830 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
COLCA2A8K830 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
COLCA2A8K830 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
COLCA2A8K830 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
COLCA2A8K830 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
COLCA2A8K830 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
COLCA2A8K830 BLK-205ENST00000529894 2017 ntTSL 5 BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms