Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TCRBV4S1A1TA0A5B7 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
TCRBV4S1A1TA0A5B7 HLA-DQB1-201ENST00000374943 1656 ntBASIC14.34□□□□□ -0.11
TCRBV4S1A1TA0A5B7 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TCRBV4S1A1TA0A5B7 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TCRBV4S1A1TA0A5B7 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC14.34□□□□□ -0.11
TCRBV4S1A1TA0A5B7 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TCRBV4S1A1TA0A5B7 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC14.34□□□□□ -0.11
TCRBV4S1A1TA0A5B7 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC14.34□□□□□ -0.11
TCRBV4S1A1TA0A5B7 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC14.34□□□□□ -0.11
TCRBV4S1A1TA0A5B7 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TCRBV4S1A1TA0A5B7 AL121894.2-201ENST00000602977 491 ntBASIC14.34□□□□□ -0.11
TCRBV4S1A1TA0A5B7 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
TCRBV4S1A1TA0A5B7 AC012313.10-201ENST00000623509 926 ntBASIC14.34□□□□□ -0.11
TCRBV4S1A1TA0A5B7 WDR6-223ENST00000627177 207 ntTSL 2 BASIC14.34□□□□□ -0.11
TCRBV4S1A1TA0A5B7 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TCRBV4S1A1TA0A5B7 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TCRBV4S1A1TA0A5B7 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TCRBV4S1A1TA0A5B7 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TCRBV4S1A1TA0A5B7 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TCRBV4S1A1TA0A5B7 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TCRBV4S1A1TA0A5B7 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TCRBV4S1A1TA0A5B7 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TCRBV4S1A1TA0A5B7 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
TCRBV4S1A1TA0A5B7 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
TCRBV4S1A1TA0A5B7 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC14.34□□□□□ -0.11
TCRBV4S1A1TA0A5B7 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TCRBV4S1A1TA0A5B7 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TCRBV4S1A1TA0A5B7 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TCRBV4S1A1TA0A5B7 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
TCRBV4S1A1TA0A5B7 Z83836.1-201ENST00000624605 1642 ntBASIC14.33□□□□□ -0.11
TCRBV4S1A1TA0A5B7 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TCRBV4S1A1TA0A5B7 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TCRBV4S1A1TA0A5B7 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
TCRBV4S1A1TA0A5B7 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TCRBV4S1A1TA0A5B7 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TCRBV4S1A1TA0A5B7 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TCRBV4S1A1TA0A5B7 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC14.33□□□□□ -0.11
TCRBV4S1A1TA0A5B7 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
TCRBV4S1A1TA0A5B7 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TCRBV4S1A1TA0A5B7 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC14.33□□□□□ -0.12
TCRBV4S1A1TA0A5B7 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
TCRBV4S1A1TA0A5B7 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TCRBV4S1A1TA0A5B7 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TCRBV4S1A1TA0A5B7 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TCRBV4S1A1TA0A5B7 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TCRBV4S1A1TA0A5B7 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TCRBV4S1A1TA0A5B7 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TCRBV4S1A1TA0A5B7 BAALC-202ENST00000306391 243 ntTSL 5 BASIC14.33□□□□□ -0.12
TCRBV4S1A1TA0A5B7 BAALC-204ENST00000330955 222 ntTSL 5 BASIC14.33□□□□□ -0.12
TCRBV4S1A1TA0A5B7 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC14.33□□□□□ -0.12
TCRBV4S1A1TA0A5B7 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TCRBV4S1A1TA0A5B7 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TCRBV4S1A1TA0A5B7 TPM4P1-201ENST00000436100 807 ntBASIC14.33□□□□□ -0.12
TCRBV4S1A1TA0A5B7 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
TCRBV4S1A1TA0A5B7 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC14.33□□□□□ -0.12
TCRBV4S1A1TA0A5B7 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC14.33□□□□□ -0.12
TCRBV4S1A1TA0A5B7 AC005332.3-201ENST00000589904 676 ntBASIC14.33□□□□□ -0.12
TCRBV4S1A1TA0A5B7 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TCRBV4S1A1TA0A5B7 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC14.33□□□□□ -0.12
TCRBV4S1A1TA0A5B7 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
TCRBV4S1A1TA0A5B7 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TCRBV4S1A1TA0A5B7 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TCRBV4S1A1TA0A5B7 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC14.33□□□□□ -0.12
TCRBV4S1A1TA0A5B7 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TCRBV4S1A1TA0A5B7 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TCRBV4S1A1TA0A5B7 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TCRBV4S1A1TA0A5B7 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC14.33□□□□□ -0.12
TCRBV4S1A1TA0A5B7 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TCRBV4S1A1TA0A5B7 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TCRBV4S1A1TA0A5B7 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TCRBV4S1A1TA0A5B7 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
TCRBV4S1A1TA0A5B7 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC14.33□□□□□ -0.12
TCRBV4S1A1TA0A5B7 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TCRBV4S1A1TA0A5B7 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TCRBV4S1A1TA0A5B7 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
TCRBV4S1A1TA0A5B7 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TCRBV4S1A1TA0A5B7 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC14.32□□□□□ -0.12
TCRBV4S1A1TA0A5B7 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
TCRBV4S1A1TA0A5B7 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
TCRBV4S1A1TA0A5B7 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TCRBV4S1A1TA0A5B7 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC14.32□□□□□ -0.12
TCRBV4S1A1TA0A5B7 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
TCRBV4S1A1TA0A5B7 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC14.32□□□□□ -0.12
TCRBV4S1A1TA0A5B7 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC14.32□□□□□ -0.12
TCRBV4S1A1TA0A5B7 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC14.32□□□□□ -0.12
TCRBV4S1A1TA0A5B7 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC14.32□□□□□ -0.12
TCRBV4S1A1TA0A5B7 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TCRBV4S1A1TA0A5B7 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC14.32□□□□□ -0.12
TCRBV4S1A1TA0A5B7 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC14.32□□□□□ -0.12
TCRBV4S1A1TA0A5B7 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TCRBV4S1A1TA0A5B7 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TCRBV4S1A1TA0A5B7 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TCRBV4S1A1TA0A5B7 PPIH-202ENST00000372549 327 ntTSL 3 BASIC14.32□□□□□ -0.12
TCRBV4S1A1TA0A5B7 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
TCRBV4S1A1TA0A5B7 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TCRBV4S1A1TA0A5B7 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TCRBV4S1A1TA0A5B7 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC14.32□□□□□ -0.12
TCRBV4S1A1TA0A5B7 REEP1-209ENST00000541910 969 ntTSL 2 BASIC14.32□□□□□ -0.12
TCRBV4S1A1TA0A5B7 RNF126P1-202ENST00000569893 925 ntBASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms