Protein–RNA interactions for Protein: A0A1B0GVL6

TMEM238L, HCG1800530, isoform CRA_b, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM238LA0A1B0GVL6 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM238LA0A1B0GVL6 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC12.51□□□□□ -0.41
TMEM238LA0A1B0GVL6 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC12.51□□□□□ -0.41
TMEM238LA0A1B0GVL6 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC12.51□□□□□ -0.41
TMEM238LA0A1B0GVL6 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM238LA0A1B0GVL6 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC12.51□□□□□ -0.41
TMEM238LA0A1B0GVL6 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC12.51□□□□□ -0.41
TMEM238LA0A1B0GVL6 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC12.51□□□□□ -0.41
TMEM238LA0A1B0GVL6 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC12.51□□□□□ -0.41
TMEM238LA0A1B0GVL6 AC133561.4-201ENST00000566112 224 ntBASIC12.51□□□□□ -0.41
TMEM238LA0A1B0GVL6 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
TMEM238LA0A1B0GVL6 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC12.51□□□□□ -0.41
TMEM238LA0A1B0GVL6 AC121493.1-201ENST00000602316 450 ntBASIC12.51□□□□□ -0.41
TMEM238LA0A1B0GVL6 OR13I1P-201ENST00000609811 1264 ntBASIC12.51□□□□□ -0.41
TMEM238LA0A1B0GVL6 AL031670.1-201ENST00000619343 669 ntTSL 3 BASIC12.51□□□□□ -0.41
TMEM238LA0A1B0GVL6 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM238LA0A1B0GVL6 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM238LA0A1B0GVL6 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM238LA0A1B0GVL6 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM238LA0A1B0GVL6 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM238LA0A1B0GVL6 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM238LA0A1B0GVL6 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM238LA0A1B0GVL6 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC12.51□□□□□ -0.41
TMEM238LA0A1B0GVL6 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM238LA0A1B0GVL6 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM238LA0A1B0GVL6 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM238LA0A1B0GVL6 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM238LA0A1B0GVL6 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM238LA0A1B0GVL6 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
TMEM238LA0A1B0GVL6 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
TMEM238LA0A1B0GVL6 KRT42P-202ENST00000438131 2895 ntTSL 2 BASIC12.51□□□□□ -0.41
TMEM238LA0A1B0GVL6 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM238LA0A1B0GVL6 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM238LA0A1B0GVL6 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
TMEM238LA0A1B0GVL6 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
TMEM238LA0A1B0GVL6 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM238LA0A1B0GVL6 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM238LA0A1B0GVL6 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TMEM238LA0A1B0GVL6 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TMEM238LA0A1B0GVL6 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TMEM238LA0A1B0GVL6 DPYSL2-206ENST00000523027 2130 ntTSL 2 BASIC12.5□□□□□ -0.41
TMEM238LA0A1B0GVL6 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC12.5□□□□□ -0.41
TMEM238LA0A1B0GVL6 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC12.5□□□□□ -0.41
TMEM238LA0A1B0GVL6 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC12.5□□□□□ -0.41
TMEM238LA0A1B0GVL6 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TMEM238LA0A1B0GVL6 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TMEM238LA0A1B0GVL6 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TMEM238LA0A1B0GVL6 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC12.5□□□□□ -0.41
TMEM238LA0A1B0GVL6 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC12.5□□□□□ -0.41
TMEM238LA0A1B0GVL6 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
TMEM238LA0A1B0GVL6 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TMEM238LA0A1B0GVL6 AC138907.5-202ENST00000569484 235 ntBASIC12.5□□□□□ -0.41
TMEM238LA0A1B0GVL6 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC12.5□□□□□ -0.41
TMEM238LA0A1B0GVL6 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC12.5□□□□□ -0.41
TMEM238LA0A1B0GVL6 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC12.5□□□□□ -0.41
TMEM238LA0A1B0GVL6 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TMEM238LA0A1B0GVL6 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TMEM238LA0A1B0GVL6 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TMEM238LA0A1B0GVL6 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC12.5□□□□□ -0.41
TMEM238LA0A1B0GVL6 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
TMEM238LA0A1B0GVL6 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
TMEM238LA0A1B0GVL6 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
TMEM238LA0A1B0GVL6 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC12.5□□□□□ -0.41
TMEM238LA0A1B0GVL6 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
TMEM238LA0A1B0GVL6 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
TMEM238LA0A1B0GVL6 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TMEM238LA0A1B0GVL6 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TMEM238LA0A1B0GVL6 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TMEM238LA0A1B0GVL6 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TMEM238LA0A1B0GVL6 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
TMEM238LA0A1B0GVL6 AC243964.3-201ENST00000623022 2028 ntBASIC12.5□□□□□ -0.41
TMEM238LA0A1B0GVL6 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC12.5□□□□□ -0.41
TMEM238LA0A1B0GVL6 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TMEM238LA0A1B0GVL6 TMPRSS13-202ENST00000445164 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
TMEM238LA0A1B0GVL6 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TMEM238LA0A1B0GVL6 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC12.5□□□□□ -0.41
TMEM238LA0A1B0GVL6 JADE1-209ENST00000511647 3560 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
TMEM238LA0A1B0GVL6 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
TMEM238LA0A1B0GVL6 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TMEM238LA0A1B0GVL6 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
TMEM238LA0A1B0GVL6 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TMEM238LA0A1B0GVL6 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TMEM238LA0A1B0GVL6 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TMEM238LA0A1B0GVL6 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TMEM238LA0A1B0GVL6 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC12.49□□□□□ -0.41
TMEM238LA0A1B0GVL6 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TMEM238LA0A1B0GVL6 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TMEM238LA0A1B0GVL6 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TMEM238LA0A1B0GVL6 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC12.49□□□□□ -0.41
TMEM238LA0A1B0GVL6 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
TMEM238LA0A1B0GVL6 AGK-211ENST00000629555 2765 ntTSL 5 BASIC12.49□□□□□ -0.41
TMEM238LA0A1B0GVL6 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
TMEM238LA0A1B0GVL6 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TMEM238LA0A1B0GVL6 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC12.49□□□□□ -0.41
TMEM238LA0A1B0GVL6 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TMEM238LA0A1B0GVL6 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TMEM238LA0A1B0GVL6 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TMEM238LA0A1B0GVL6 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC12.49□□□□□ -0.41
TMEM238LA0A1B0GVL6 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC12.49□□□□□ -0.41
TMEM238LA0A1B0GVL6 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC12.49□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms