Protein–RNA interactions for Protein: Q9Y279

VSIG4, V-set and immunoglobulin domain-containing protein 4, humanhuman

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSIG4Q9Y279 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
VSIG4Q9Y279 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
VSIG4Q9Y279 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
VSIG4Q9Y279 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
VSIG4Q9Y279 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.6■□□□□ 0.89
VSIG4Q9Y279 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
VSIG4Q9Y279 AC142472.1-201ENST00000612013 1741 ntBASIC20.59■□□□□ 0.89
VSIG4Q9Y279 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
VSIG4Q9Y279 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
VSIG4Q9Y279 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC20.59■□□□□ 0.89
VSIG4Q9Y279 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VSIG4Q9Y279 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
VSIG4Q9Y279 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VSIG4Q9Y279 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
VSIG4Q9Y279 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
VSIG4Q9Y279 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
VSIG4Q9Y279 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
VSIG4Q9Y279 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC20.58■□□□□ 0.89
VSIG4Q9Y279 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC20.58■□□□□ 0.89
VSIG4Q9Y279 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
VSIG4Q9Y279 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC20.58■□□□□ 0.89
VSIG4Q9Y279 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC20.58■□□□□ 0.88
VSIG4Q9Y279 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC20.58■□□□□ 0.88
VSIG4Q9Y279 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
VSIG4Q9Y279 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
VSIG4Q9Y279 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
VSIG4Q9Y279 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
VSIG4Q9Y279 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
VSIG4Q9Y279 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
VSIG4Q9Y279 BOD1-206ENST00000480951 814 ntTSL 2 BASIC20.57■□□□□ 0.88
VSIG4Q9Y279 AC142381.3-201ENST00000568208 1670 ntBASIC20.57■□□□□ 0.88
VSIG4Q9Y279 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VSIG4Q9Y279 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.57■□□□□ 0.88
VSIG4Q9Y279 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
VSIG4Q9Y279 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
VSIG4Q9Y279 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
VSIG4Q9Y279 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.56■□□□□ 0.88
VSIG4Q9Y279 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
VSIG4Q9Y279 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
VSIG4Q9Y279 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.55■□□□□ 0.88
VSIG4Q9Y279 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
VSIG4Q9Y279 AC108673.1-201ENST00000510422 1159 ntBASIC20.55■□□□□ 0.88
VSIG4Q9Y279 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
VSIG4Q9Y279 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
VSIG4Q9Y279 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
VSIG4Q9Y279 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
VSIG4Q9Y279 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.55■□□□□ 0.88
VSIG4Q9Y279 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
VSIG4Q9Y279 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VSIG4Q9Y279 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VSIG4Q9Y279 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VSIG4Q9Y279 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
VSIG4Q9Y279 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
VSIG4Q9Y279 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
VSIG4Q9Y279 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
VSIG4Q9Y279 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
VSIG4Q9Y279 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VSIG4Q9Y279 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
VSIG4Q9Y279 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
VSIG4Q9Y279 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC20.53■□□□□ 0.88
VSIG4Q9Y279 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VSIG4Q9Y279 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.53■□□□□ 0.88
VSIG4Q9Y279 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
VSIG4Q9Y279 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VSIG4Q9Y279 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.52■□□□□ 0.88
VSIG4Q9Y279 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
VSIG4Q9Y279 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
VSIG4Q9Y279 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
VSIG4Q9Y279 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.52■□□□□ 0.88
VSIG4Q9Y279 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.52■□□□□ 0.88
VSIG4Q9Y279 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
VSIG4Q9Y279 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
VSIG4Q9Y279 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
VSIG4Q9Y279 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
VSIG4Q9Y279 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
VSIG4Q9Y279 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
VSIG4Q9Y279 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC20.51■□□□□ 0.87
VSIG4Q9Y279 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.5■□□□□ 0.87
VSIG4Q9Y279 AC010501.1-201ENST00000606270 1962 ntBASIC20.5■□□□□ 0.87
VSIG4Q9Y279 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
VSIG4Q9Y279 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
VSIG4Q9Y279 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
VSIG4Q9Y279 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20.5■□□□□ 0.87
VSIG4Q9Y279 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
VSIG4Q9Y279 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
VSIG4Q9Y279 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
VSIG4Q9Y279 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.5■□□□□ 0.87
VSIG4Q9Y279 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
VSIG4Q9Y279 AL139125.2-201ENST00000623134 1869 ntBASIC20.5■□□□□ 0.87
VSIG4Q9Y279 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
VSIG4Q9Y279 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
VSIG4Q9Y279 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
VSIG4Q9Y279 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
VSIG4Q9Y279 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
VSIG4Q9Y279 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC20.49■□□□□ 0.87
VSIG4Q9Y279 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
VSIG4Q9Y279 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC20.49■□□□□ 0.87
VSIG4Q9Y279 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.49■□□□□ 0.87
VSIG4Q9Y279 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
VSIG4Q9Y279 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms