Protein–RNA interactions for Protein: Q9HCJ2

LRRC4C, Leucine-rich repeat-containing protein 4C, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC4CQ9HCJ2 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
LRRC4CQ9HCJ2 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC25.09■■□□□ 1.61
LRRC4CQ9HCJ2 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
LRRC4CQ9HCJ2 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
LRRC4CQ9HCJ2 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC25.09■■□□□ 1.61
LRRC4CQ9HCJ2 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
LRRC4CQ9HCJ2 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC25.08■■□□□ 1.61
LRRC4CQ9HCJ2 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
LRRC4CQ9HCJ2 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC25.08■■□□□ 1.61
LRRC4CQ9HCJ2 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.61
LRRC4CQ9HCJ2 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC25.07■■□□□ 1.6
LRRC4CQ9HCJ2 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC25.07■■□□□ 1.6
LRRC4CQ9HCJ2 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
LRRC4CQ9HCJ2 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC25.07■■□□□ 1.6
LRRC4CQ9HCJ2 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
LRRC4CQ9HCJ2 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC25.07■■□□□ 1.6
LRRC4CQ9HCJ2 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
LRRC4CQ9HCJ2 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC25.07■■□□□ 1.6
LRRC4CQ9HCJ2 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC25.07■■□□□ 1.6
LRRC4CQ9HCJ2 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
LRRC4CQ9HCJ2 AC142472.1-201ENST00000612013 1741 ntBASIC25.06■■□□□ 1.6
LRRC4CQ9HCJ2 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
LRRC4CQ9HCJ2 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
LRRC4CQ9HCJ2 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC25.06■■□□□ 1.6
LRRC4CQ9HCJ2 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
LRRC4CQ9HCJ2 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
LRRC4CQ9HCJ2 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
LRRC4CQ9HCJ2 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
LRRC4CQ9HCJ2 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
LRRC4CQ9HCJ2 THRA-202ENST00000394121 2260 ntTSL 2 BASIC25.05■■□□□ 1.6
LRRC4CQ9HCJ2 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
LRRC4CQ9HCJ2 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
LRRC4CQ9HCJ2 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
LRRC4CQ9HCJ2 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
LRRC4CQ9HCJ2 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
LRRC4CQ9HCJ2 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
LRRC4CQ9HCJ2 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC25.03■■□□□ 1.6
LRRC4CQ9HCJ2 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
LRRC4CQ9HCJ2 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC25.03■■□□□ 1.6
LRRC4CQ9HCJ2 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
LRRC4CQ9HCJ2 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
LRRC4CQ9HCJ2 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
LRRC4CQ9HCJ2 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC25.02■■□□□ 1.6
LRRC4CQ9HCJ2 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
LRRC4CQ9HCJ2 WHAMMP3-201ENST00000611636 1609 ntBASIC25.02■■□□□ 1.6
LRRC4CQ9HCJ2 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC25.02■■□□□ 1.6
LRRC4CQ9HCJ2 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC25.02■■□□□ 1.6
LRRC4CQ9HCJ2 ZNRF2P2-203ENST00000454624 420 ntBASIC25.02■■□□□ 1.6
LRRC4CQ9HCJ2 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC25.02■■□□□ 1.6
LRRC4CQ9HCJ2 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC25.02■■□□□ 1.6
LRRC4CQ9HCJ2 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC25.02■■□□□ 1.6
LRRC4CQ9HCJ2 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
LRRC4CQ9HCJ2 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC25.02■■□□□ 1.6
LRRC4CQ9HCJ2 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC25.01■■□□□ 1.59
LRRC4CQ9HCJ2 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
LRRC4CQ9HCJ2 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC25.01■■□□□ 1.59
LRRC4CQ9HCJ2 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC25.01■■□□□ 1.59
LRRC4CQ9HCJ2 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC25.01■■□□□ 1.59
LRRC4CQ9HCJ2 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
LRRC4CQ9HCJ2 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
LRRC4CQ9HCJ2 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
LRRC4CQ9HCJ2 LTK-203ENST00000453182 2412 ntTSL 2 BASIC25■■□□□ 1.59
LRRC4CQ9HCJ2 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
LRRC4CQ9HCJ2 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC25■■□□□ 1.59
LRRC4CQ9HCJ2 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
LRRC4CQ9HCJ2 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC24.98■■□□□ 1.59
LRRC4CQ9HCJ2 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC24.98■■□□□ 1.59
LRRC4CQ9HCJ2 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
LRRC4CQ9HCJ2 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
LRRC4CQ9HCJ2 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
LRRC4CQ9HCJ2 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC24.97■■□□□ 1.59
LRRC4CQ9HCJ2 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC24.97■■□□□ 1.59
LRRC4CQ9HCJ2 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
LRRC4CQ9HCJ2 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
LRRC4CQ9HCJ2 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC24.96■■□□□ 1.59
LRRC4CQ9HCJ2 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC24.96■■□□□ 1.59
LRRC4CQ9HCJ2 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC24.96■■□□□ 1.59
LRRC4CQ9HCJ2 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC24.95■■□□□ 1.59
LRRC4CQ9HCJ2 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
LRRC4CQ9HCJ2 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC24.95■■□□□ 1.59
LRRC4CQ9HCJ2 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
LRRC4CQ9HCJ2 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC24.95■■□□□ 1.58
LRRC4CQ9HCJ2 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC24.95■■□□□ 1.58
LRRC4CQ9HCJ2 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
LRRC4CQ9HCJ2 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
LRRC4CQ9HCJ2 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC24.95■■□□□ 1.58
LRRC4CQ9HCJ2 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC24.95■■□□□ 1.58
LRRC4CQ9HCJ2 MED17-227ENST00000640521 2047 ntTSL 5 BASIC24.95■■□□□ 1.58
LRRC4CQ9HCJ2 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC24.94■■□□□ 1.58
LRRC4CQ9HCJ2 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC24.94■■□□□ 1.58
LRRC4CQ9HCJ2 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
LRRC4CQ9HCJ2 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC24.94■■□□□ 1.58
LRRC4CQ9HCJ2 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
LRRC4CQ9HCJ2 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC24.93■■□□□ 1.58
LRRC4CQ9HCJ2 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC24.93■■□□□ 1.58
LRRC4CQ9HCJ2 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC24.93■■□□□ 1.58
LRRC4CQ9HCJ2 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
LRRC4CQ9HCJ2 PREB-202ENST00000406567 1910 ntTSL 5 BASIC24.93■■□□□ 1.58
LRRC4CQ9HCJ2 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
LRRC4CQ9HCJ2 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms