Protein–RNA interactions for Protein: Q9H741

C12orf49, UPF0454 protein C12orf49, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf49Q9H741 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
C12orf49Q9H741 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
C12orf49Q9H741 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
C12orf49Q9H741 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
C12orf49Q9H741 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
C12orf49Q9H741 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
C12orf49Q9H741 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC21.78■■□□□ 1.08
C12orf49Q9H741 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
C12orf49Q9H741 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC21.78■■□□□ 1.08
C12orf49Q9H741 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC21.77■■□□□ 1.08
C12orf49Q9H741 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
C12orf49Q9H741 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
C12orf49Q9H741 RP9P-202ENST00000450133 1212 ntBASIC21.77■■□□□ 1.08
C12orf49Q9H741 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
C12orf49Q9H741 MIR3960-201ENST00000583311 91 ntBASIC21.77■■□□□ 1.08
C12orf49Q9H741 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
C12orf49Q9H741 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.07
C12orf49Q9H741 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
C12orf49Q9H741 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
C12orf49Q9H741 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
C12orf49Q9H741 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
C12orf49Q9H741 AC093536.1-201ENST00000569153 554 ntBASIC21.76■■□□□ 1.07
C12orf49Q9H741 AC133552.2-201ENST00000619106 1032 ntBASIC21.76■■□□□ 1.07
C12orf49Q9H741 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
C12orf49Q9H741 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
C12orf49Q9H741 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC21.75■■□□□ 1.07
C12orf49Q9H741 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
C12orf49Q9H741 AC009831.1-201ENST00000580420 1582 ntBASIC21.75■■□□□ 1.07
C12orf49Q9H741 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC21.75■■□□□ 1.07
C12orf49Q9H741 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
C12orf49Q9H741 PFN2-211ENST00000489155 636 ntTSL 4 BASIC21.75■■□□□ 1.07
C12orf49Q9H741 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
C12orf49Q9H741 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
C12orf49Q9H741 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
C12orf49Q9H741 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
C12orf49Q9H741 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC21.74■■□□□ 1.07
C12orf49Q9H741 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
C12orf49Q9H741 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
C12orf49Q9H741 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
C12orf49Q9H741 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
C12orf49Q9H741 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC21.74■■□□□ 1.07
C12orf49Q9H741 KRT18P60-201ENST00000312876 1297 ntBASIC21.73■■□□□ 1.07
C12orf49Q9H741 AC012354.3-201ENST00000623734 483 ntBASIC21.73■■□□□ 1.07
C12orf49Q9H741 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
C12orf49Q9H741 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
C12orf49Q9H741 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
C12orf49Q9H741 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
C12orf49Q9H741 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
C12orf49Q9H741 AC026202.3-201ENST00000600805 1127 ntBASIC21.72■■□□□ 1.07
C12orf49Q9H741 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
C12orf49Q9H741 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC21.72■■□□□ 1.07
C12orf49Q9H741 AL592293.1-201ENST00000502889 1188 ntBASIC21.71■■□□□ 1.07
C12orf49Q9H741 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
C12orf49Q9H741 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
C12orf49Q9H741 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
C12orf49Q9H741 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC21.7■■□□□ 1.06
C12orf49Q9H741 SHF-208ENST00000560734 1731 ntTSL 3 BASIC21.7■■□□□ 1.06
C12orf49Q9H741 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
C12orf49Q9H741 HES4-204ENST00000484667 667 ntTSL 3 BASIC21.7■■□□□ 1.06
C12orf49Q9H741 GFER-205ENST00000569451 517 ntTSL 5 BASIC21.7■■□□□ 1.06
C12orf49Q9H741 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC21.7■■□□□ 1.06
C12orf49Q9H741 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
C12orf49Q9H741 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
C12orf49Q9H741 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
C12orf49Q9H741 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
C12orf49Q9H741 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
C12orf49Q9H741 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC21.69■■□□□ 1.06
C12orf49Q9H741 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
C12orf49Q9H741 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
C12orf49Q9H741 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC21.68■■□□□ 1.06
C12orf49Q9H741 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
C12orf49Q9H741 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
C12orf49Q9H741 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
C12orf49Q9H741 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
C12orf49Q9H741 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
C12orf49Q9H741 AP004609.3-201ENST00000610705 1884 ntBASIC21.68■■□□□ 1.06
C12orf49Q9H741 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
C12orf49Q9H741 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
C12orf49Q9H741 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
C12orf49Q9H741 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
C12orf49Q9H741 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
C12orf49Q9H741 AL033527.3-201ENST00000566366 1196 ntBASIC21.67■■□□□ 1.06
C12orf49Q9H741 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC21.67■■□□□ 1.06
C12orf49Q9H741 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
C12orf49Q9H741 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
C12orf49Q9H741 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
C12orf49Q9H741 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC21.66■■□□□ 1.06
C12orf49Q9H741 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
C12orf49Q9H741 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
C12orf49Q9H741 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
C12orf49Q9H741 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC21.65■■□□□ 1.06
C12orf49Q9H741 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
C12orf49Q9H741 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC21.65■■□□□ 1.06
C12orf49Q9H741 RAP2CP1-202ENST00000605179 643 ntBASIC21.65■■□□□ 1.06
C12orf49Q9H741 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
C12orf49Q9H741 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
C12orf49Q9H741 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC21.65■■□□□ 1.06
C12orf49Q9H741 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
C12orf49Q9H741 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
C12orf49Q9H741 AC142472.1-201ENST00000612013 1741 ntBASIC21.64■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms