Protein–RNA interactions for Protein: Q9H251

CDH23, Cadherin-23, humanhuman

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23Q9H251 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC26.68■■□□□ 1.86
CDH23Q9H251 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC26.68■■□□□ 1.86
CDH23Q9H251 RARRES2P6-201ENST00000567333 442 ntBASIC26.68■■□□□ 1.86
CDH23Q9H251 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
CDH23Q9H251 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC26.68■■□□□ 1.86
CDH23Q9H251 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC26.67■■□□□ 1.86
CDH23Q9H251 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC26.67■■□□□ 1.86
CDH23Q9H251 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC26.67■■□□□ 1.86
CDH23Q9H251 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
CDH23Q9H251 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
CDH23Q9H251 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC26.66■■□□□ 1.86
CDH23Q9H251 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC26.66■■□□□ 1.86
CDH23Q9H251 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC26.66■■□□□ 1.86
CDH23Q9H251 AC092666.2-201ENST00000613287 246 ntBASIC26.66■■□□□ 1.86
CDH23Q9H251 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CDH23Q9H251 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
CDH23Q9H251 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC26.65■■□□□ 1.86
CDH23Q9H251 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CDH23Q9H251 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
CDH23Q9H251 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC26.64■■□□□ 1.86
CDH23Q9H251 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
CDH23Q9H251 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC26.64■■□□□ 1.85
CDH23Q9H251 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC26.64■■□□□ 1.85
CDH23Q9H251 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC26.63■■□□□ 1.85
CDH23Q9H251 AC131281.2-201ENST00000520478 145 ntBASIC26.63■■□□□ 1.85
CDH23Q9H251 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC26.63■■□□□ 1.85
CDH23Q9H251 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC26.62■■□□□ 1.85
CDH23Q9H251 MTX2-204ENST00000443241 799 ntTSL 3 BASIC26.62■■□□□ 1.85
CDH23Q9H251 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CDH23Q9H251 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CDH23Q9H251 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
CDH23Q9H251 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC26.61■■□□□ 1.85
CDH23Q9H251 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
CDH23Q9H251 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
CDH23Q9H251 TK2-216ENST00000564917 1156 ntTSL 3 BASIC26.6■■□□□ 1.85
CDH23Q9H251 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC26.6■■□□□ 1.85
CDH23Q9H251 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
CDH23Q9H251 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC26.59■■□□□ 1.85
CDH23Q9H251 AC018755.3-202ENST00000596210 929 ntBASIC26.59■■□□□ 1.85
CDH23Q9H251 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
CDH23Q9H251 UNC93B8-201ENST00000511903 705 ntBASIC26.59■■□□□ 1.85
CDH23Q9H251 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC26.58■■□□□ 1.85
CDH23Q9H251 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC26.58■■□□□ 1.85
CDH23Q9H251 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC26.58■■□□□ 1.85
CDH23Q9H251 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
CDH23Q9H251 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
CDH23Q9H251 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
CDH23Q9H251 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC26.57■■□□□ 1.84
CDH23Q9H251 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CDH23Q9H251 AC019171.1-201ENST00000601251 1056 ntBASIC26.57■■□□□ 1.84
CDH23Q9H251 MIR4787-201ENST00000607364 84 ntBASIC26.57■■□□□ 1.84
CDH23Q9H251 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC26.56■■□□□ 1.84
CDH23Q9H251 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC26.55■■□□□ 1.84
CDH23Q9H251 PFN2-211ENST00000489155 636 ntTSL 4 BASIC26.54■■□□□ 1.84
CDH23Q9H251 AC110285.6-201ENST00000617652 491 ntBASIC26.54■■□□□ 1.84
CDH23Q9H251 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CDH23Q9H251 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CDH23Q9H251 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CDH23Q9H251 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC26.54■■□□□ 1.84
CDH23Q9H251 MIR3960-201ENST00000583311 91 ntBASIC26.54■■□□□ 1.84
CDH23Q9H251 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
CDH23Q9H251 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
CDH23Q9H251 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
CDH23Q9H251 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC26.52■■□□□ 1.84
CDH23Q9H251 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
CDH23Q9H251 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
CDH23Q9H251 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CDH23Q9H251 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
CDH23Q9H251 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
CDH23Q9H251 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
CDH23Q9H251 LONRF2P2-201ENST00000439212 571 ntBASIC26.49■■□□□ 1.83
CDH23Q9H251 KRT125P-201ENST00000546827 989 ntBASIC26.49■■□□□ 1.83
CDH23Q9H251 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC26.49■■□□□ 1.83
CDH23Q9H251 AC087393.1-201ENST00000582896 145 ntBASIC26.49■■□□□ 1.83
CDH23Q9H251 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
CDH23Q9H251 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC26.49■■□□□ 1.83
CDH23Q9H251 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CDH23Q9H251 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CDH23Q9H251 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC26.49■■□□□ 1.83
CDH23Q9H251 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
CDH23Q9H251 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC26.48■■□□□ 1.83
CDH23Q9H251 AC005837.3-201ENST00000612163 286 ntBASIC26.47■■□□□ 1.83
CDH23Q9H251 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
CDH23Q9H251 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CDH23Q9H251 ABCB10P3-201ENST00000561950 2166 ntBASIC26.46■■□□□ 1.83
CDH23Q9H251 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC26.46■■□□□ 1.83
CDH23Q9H251 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC26.45■■□□□ 1.83
CDH23Q9H251 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
CDH23Q9H251 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
CDH23Q9H251 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC26.45■■□□□ 1.83
CDH23Q9H251 TRIR-202ENST00000588213 841 ntTSL 3 BASIC26.45■■□□□ 1.83
CDH23Q9H251 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC26.45■■□□□ 1.83
CDH23Q9H251 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.82
CDH23Q9H251 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
CDH23Q9H251 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
CDH23Q9H251 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC26.45■■□□□ 1.82
CDH23Q9H251 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
CDH23Q9H251 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC26.44■■□□□ 1.82
CDH23Q9H251 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
CDH23Q9H251 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms