Protein–RNA interactions for Protein: Q9BTD1

SHANK2-AS3, Putative uncharacterized protein SHANK2-AS3, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3Q9BTD1 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
SHANK2-AS3Q9BTD1 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SHANK2-AS3Q9BTD1 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SHANK2-AS3Q9BTD1 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SHANK2-AS3Q9BTD1 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC18.82■□□□□ 0.6
SHANK2-AS3Q9BTD1 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC18.82■□□□□ 0.6
SHANK2-AS3Q9BTD1 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC18.82■□□□□ 0.6
SHANK2-AS3Q9BTD1 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC18.82■□□□□ 0.6
SHANK2-AS3Q9BTD1 CHML-204ENST00000638121 920 ntTSL 2 BASIC18.82■□□□□ 0.6
SHANK2-AS3Q9BTD1 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SHANK2-AS3Q9BTD1 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
SHANK2-AS3Q9BTD1 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SHANK2-AS3Q9BTD1 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SHANK2-AS3Q9BTD1 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SHANK2-AS3Q9BTD1 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SHANK2-AS3Q9BTD1 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SHANK2-AS3Q9BTD1 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SHANK2-AS3Q9BTD1 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SHANK2-AS3Q9BTD1 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC18.8■□□□□ 0.6
SHANK2-AS3Q9BTD1 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
SHANK2-AS3Q9BTD1 LINC01971-201ENST00000617888 1048 ntBASIC18.8■□□□□ 0.6
SHANK2-AS3Q9BTD1 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC18.8■□□□□ 0.6
SHANK2-AS3Q9BTD1 AC010501.1-201ENST00000606270 1962 ntBASIC18.8■□□□□ 0.6
SHANK2-AS3Q9BTD1 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SHANK2-AS3Q9BTD1 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SHANK2-AS3Q9BTD1 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
SHANK2-AS3Q9BTD1 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SHANK2-AS3Q9BTD1 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
SHANK2-AS3Q9BTD1 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SHANK2-AS3Q9BTD1 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
SHANK2-AS3Q9BTD1 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC18.79■□□□□ 0.6
SHANK2-AS3Q9BTD1 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
SHANK2-AS3Q9BTD1 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
SHANK2-AS3Q9BTD1 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
SHANK2-AS3Q9BTD1 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SHANK2-AS3Q9BTD1 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
SHANK2-AS3Q9BTD1 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SHANK2-AS3Q9BTD1 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SHANK2-AS3Q9BTD1 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC18.77■□□□□ 0.6
SHANK2-AS3Q9BTD1 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SHANK2-AS3Q9BTD1 HGH1-207ENST00000628266 258 ntTSL 5 BASIC18.77■□□□□ 0.6
SHANK2-AS3Q9BTD1 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC18.77■□□□□ 0.6
SHANK2-AS3Q9BTD1 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SHANK2-AS3Q9BTD1 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SHANK2-AS3Q9BTD1 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SHANK2-AS3Q9BTD1 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
SHANK2-AS3Q9BTD1 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SHANK2-AS3Q9BTD1 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SHANK2-AS3Q9BTD1 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
SHANK2-AS3Q9BTD1 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SHANK2-AS3Q9BTD1 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SHANK2-AS3Q9BTD1 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SHANK2-AS3Q9BTD1 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SHANK2-AS3Q9BTD1 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SHANK2-AS3Q9BTD1 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
SHANK2-AS3Q9BTD1 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
SHANK2-AS3Q9BTD1 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC18.76■□□□□ 0.59
SHANK2-AS3Q9BTD1 ERN1-208ENST00000606895 2068 ntBASIC18.76■□□□□ 0.59
SHANK2-AS3Q9BTD1 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SHANK2-AS3Q9BTD1 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SHANK2-AS3Q9BTD1 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
SHANK2-AS3Q9BTD1 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
SHANK2-AS3Q9BTD1 AC008813.1-201ENST00000536597 885 ntBASIC18.75■□□□□ 0.59
SHANK2-AS3Q9BTD1 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SHANK2-AS3Q9BTD1 SNAI3-AS1-204ENST00000567997 2048 ntBASIC18.74■□□□□ 0.59
SHANK2-AS3Q9BTD1 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SHANK2-AS3Q9BTD1 DUX4L13-201ENST00000554103 1267 ntBASIC18.74■□□□□ 0.59
SHANK2-AS3Q9BTD1 DUX4L15-201ENST00000611059 1267 ntBASIC18.74■□□□□ 0.59
SHANK2-AS3Q9BTD1 DUX4L23-201ENST00000615195 1269 ntBASIC18.74■□□□□ 0.59
SHANK2-AS3Q9BTD1 DUX4L24-201ENST00000617576 1269 ntBASIC18.74■□□□□ 0.59
SHANK2-AS3Q9BTD1 DUX4L22-201ENST00000618238 1269 ntBASIC18.74■□□□□ 0.59
SHANK2-AS3Q9BTD1 DUX4L20-201ENST00000619712 1269 ntBASIC18.74■□□□□ 0.59
SHANK2-AS3Q9BTD1 DUX4L21-201ENST00000622058 1269 ntBASIC18.74■□□□□ 0.59
SHANK2-AS3Q9BTD1 DUX4L10-201ENST00000622460 1267 ntBASIC18.74■□□□□ 0.59
SHANK2-AS3Q9BTD1 DUX4L25-201ENST00000624915 1269 ntBASIC18.74■□□□□ 0.59
SHANK2-AS3Q9BTD1 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SHANK2-AS3Q9BTD1 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SHANK2-AS3Q9BTD1 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC18.73■□□□□ 0.59
SHANK2-AS3Q9BTD1 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC18.73■□□□□ 0.59
SHANK2-AS3Q9BTD1 CEBPA-AS1-201ENST00000592982 2198 ntBASIC18.73■□□□□ 0.59
SHANK2-AS3Q9BTD1 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC18.73■□□□□ 0.59
SHANK2-AS3Q9BTD1 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC18.72■□□□□ 0.59
SHANK2-AS3Q9BTD1 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SHANK2-AS3Q9BTD1 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SHANK2-AS3Q9BTD1 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SHANK2-AS3Q9BTD1 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC18.72■□□□□ 0.59
SHANK2-AS3Q9BTD1 CHST11-202ENST00000546689 756 ntTSL 2 BASIC18.72■□□□□ 0.59
SHANK2-AS3Q9BTD1 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
SHANK2-AS3Q9BTD1 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC18.72■□□□□ 0.59
SHANK2-AS3Q9BTD1 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SHANK2-AS3Q9BTD1 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC18.72■□□□□ 0.59
SHANK2-AS3Q9BTD1 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC18.72■□□□□ 0.59
SHANK2-AS3Q9BTD1 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SHANK2-AS3Q9BTD1 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC18.71■□□□□ 0.59
SHANK2-AS3Q9BTD1 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SHANK2-AS3Q9BTD1 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SHANK2-AS3Q9BTD1 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC18.71■□□□□ 0.59
SHANK2-AS3Q9BTD1 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SHANK2-AS3Q9BTD1 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
SHANK2-AS3Q9BTD1 MIR219A2-201ENST00000608502 1504 ntBASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms