Protein–RNA interactions for Protein: Q96NZ1

FOXN4, Forkhead box protein N4, humanhuman

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4Q96NZ1 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
FOXN4Q96NZ1 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
FOXN4Q96NZ1 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
FOXN4Q96NZ1 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
FOXN4Q96NZ1 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
FOXN4Q96NZ1 HSD17B1P1-201ENST00000590052 955 ntBASIC21.87■■□□□ 1.09
FOXN4Q96NZ1 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC21.87■■□□□ 1.09
FOXN4Q96NZ1 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
FOXN4Q96NZ1 AC142472.1-201ENST00000612013 1741 ntBASIC21.86■■□□□ 1.09
FOXN4Q96NZ1 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
FOXN4Q96NZ1 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
FOXN4Q96NZ1 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
FOXN4Q96NZ1 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
FOXN4Q96NZ1 ABHD17AP3-201ENST00000503096 1137 ntBASIC21.85■■□□□ 1.09
FOXN4Q96NZ1 AC008813.1-201ENST00000536597 885 ntBASIC21.85■■□□□ 1.09
FOXN4Q96NZ1 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.85■■□□□ 1.09
FOXN4Q96NZ1 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
FOXN4Q96NZ1 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC21.84■■□□□ 1.09
FOXN4Q96NZ1 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC21.84■■□□□ 1.09
FOXN4Q96NZ1 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
FOXN4Q96NZ1 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
FOXN4Q96NZ1 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
FOXN4Q96NZ1 CHST11-203ENST00000547956 936 ntTSL 2 BASIC21.83■■□□□ 1.09
FOXN4Q96NZ1 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
FOXN4Q96NZ1 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
FOXN4Q96NZ1 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
FOXN4Q96NZ1 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
FOXN4Q96NZ1 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.83■■□□□ 1.08
FOXN4Q96NZ1 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
FOXN4Q96NZ1 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
FOXN4Q96NZ1 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
FOXN4Q96NZ1 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
FOXN4Q96NZ1 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
FOXN4Q96NZ1 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
FOXN4Q96NZ1 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC21.81■■□□□ 1.08
FOXN4Q96NZ1 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
FOXN4Q96NZ1 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.81■■□□□ 1.08
FOXN4Q96NZ1 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
FOXN4Q96NZ1 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
FOXN4Q96NZ1 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
FOXN4Q96NZ1 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
FOXN4Q96NZ1 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC21.8■■□□□ 1.08
FOXN4Q96NZ1 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
FOXN4Q96NZ1 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC21.8■■□□□ 1.08
FOXN4Q96NZ1 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC21.8■■□□□ 1.08
FOXN4Q96NZ1 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
FOXN4Q96NZ1 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
FOXN4Q96NZ1 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
FOXN4Q96NZ1 AC092803.2-201ENST00000564287 1899 ntBASIC21.79■■□□□ 1.08
FOXN4Q96NZ1 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC21.79■■□□□ 1.08
FOXN4Q96NZ1 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
FOXN4Q96NZ1 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
FOXN4Q96NZ1 AC148477.6-201ENST00000623746 465 ntBASIC21.79■■□□□ 1.08
FOXN4Q96NZ1 BRD4-212ENST00000630599 726 ntTSL 2 BASIC21.79■■□□□ 1.08
FOXN4Q96NZ1 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC21.79■■□□□ 1.08
FOXN4Q96NZ1 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
FOXN4Q96NZ1 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.78■■□□□ 1.08
FOXN4Q96NZ1 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
FOXN4Q96NZ1 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
FOXN4Q96NZ1 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
FOXN4Q96NZ1 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC21.78■■□□□ 1.08
FOXN4Q96NZ1 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
FOXN4Q96NZ1 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC21.78■■□□□ 1.08
FOXN4Q96NZ1 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.78■■□□□ 1.08
FOXN4Q96NZ1 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.78■■□□□ 1.08
FOXN4Q96NZ1 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC21.78■■□□□ 1.08
FOXN4Q96NZ1 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
FOXN4Q96NZ1 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
FOXN4Q96NZ1 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
FOXN4Q96NZ1 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
FOXN4Q96NZ1 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC21.77■■□□□ 1.08
FOXN4Q96NZ1 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
FOXN4Q96NZ1 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
FOXN4Q96NZ1 AC145676.1-201ENST00000514988 2004 ntBASIC21.77■■□□□ 1.07
FOXN4Q96NZ1 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
FOXN4Q96NZ1 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.76■■□□□ 1.07
FOXN4Q96NZ1 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
FOXN4Q96NZ1 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.76■■□□□ 1.07
FOXN4Q96NZ1 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
FOXN4Q96NZ1 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
FOXN4Q96NZ1 AL359258.2-201ENST00000564063 1566 ntBASIC21.75■■□□□ 1.07
FOXN4Q96NZ1 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
FOXN4Q96NZ1 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
FOXN4Q96NZ1 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC21.75■■□□□ 1.07
FOXN4Q96NZ1 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC21.75■■□□□ 1.07
FOXN4Q96NZ1 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
FOXN4Q96NZ1 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
FOXN4Q96NZ1 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
FOXN4Q96NZ1 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
FOXN4Q96NZ1 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
FOXN4Q96NZ1 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.74■■□□□ 1.07
FOXN4Q96NZ1 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
FOXN4Q96NZ1 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
FOXN4Q96NZ1 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
FOXN4Q96NZ1 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
FOXN4Q96NZ1 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
FOXN4Q96NZ1 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
FOXN4Q96NZ1 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC21.73■■□□□ 1.07
FOXN4Q96NZ1 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
FOXN4Q96NZ1 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms