Protein–RNA interactions for Protein: Q96K19

RNF170, E3 ubiquitin-protein ligase RNF170, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF170Q96K19 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RNF170Q96K19 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
RNF170Q96K19 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC21.61■■□□□ 1.05
RNF170Q96K19 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
RNF170Q96K19 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RNF170Q96K19 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RNF170Q96K19 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
RNF170Q96K19 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
RNF170Q96K19 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
RNF170Q96K19 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RNF170Q96K19 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RNF170Q96K19 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RNF170Q96K19 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC21.59■■□□□ 1.05
RNF170Q96K19 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
RNF170Q96K19 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
RNF170Q96K19 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
RNF170Q96K19 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RNF170Q96K19 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
RNF170Q96K19 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
RNF170Q96K19 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.04
RNF170Q96K19 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RNF170Q96K19 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
RNF170Q96K19 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RNF170Q96K19 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RNF170Q96K19 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RNF170Q96K19 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RNF170Q96K19 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
RNF170Q96K19 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RNF170Q96K19 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.57■■□□□ 1.04
RNF170Q96K19 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC21.56■■□□□ 1.04
RNF170Q96K19 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RNF170Q96K19 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.55■■□□□ 1.04
RNF170Q96K19 AC110285.7-201ENST00000624417 1536 ntBASIC21.55■■□□□ 1.04
RNF170Q96K19 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RNF170Q96K19 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
RNF170Q96K19 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RNF170Q96K19 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RNF170Q96K19 MLEC-202ENST00000412616 841 ntTSL 3 BASIC21.54■■□□□ 1.04
RNF170Q96K19 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
RNF170Q96K19 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
RNF170Q96K19 AC018358.1-201ENST00000631079 1402 ntBASIC21.54■■□□□ 1.04
RNF170Q96K19 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
RNF170Q96K19 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RNF170Q96K19 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
RNF170Q96K19 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RNF170Q96K19 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC21.53■■□□□ 1.04
RNF170Q96K19 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RNF170Q96K19 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
RNF170Q96K19 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.53■■□□□ 1.04
RNF170Q96K19 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.53■■□□□ 1.04
RNF170Q96K19 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RNF170Q96K19 LINC00543-201ENST00000567234 1845 ntBASIC21.52■■□□□ 1.04
RNF170Q96K19 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
RNF170Q96K19 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC21.52■■□□□ 1.04
RNF170Q96K19 AC012676.1-201ENST00000574705 1949 ntBASIC21.52■■□□□ 1.04
RNF170Q96K19 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
RNF170Q96K19 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.52■■□□□ 1.03
RNF170Q96K19 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.51■■□□□ 1.03
RNF170Q96K19 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.51■■□□□ 1.03
RNF170Q96K19 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
RNF170Q96K19 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RNF170Q96K19 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
RNF170Q96K19 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RNF170Q96K19 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
RNF170Q96K19 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
RNF170Q96K19 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
RNF170Q96K19 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RNF170Q96K19 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC21.5■■□□□ 1.03
RNF170Q96K19 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC21.5■■□□□ 1.03
RNF170Q96K19 LINC01971-201ENST00000617888 1048 ntBASIC21.5■■□□□ 1.03
RNF170Q96K19 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RNF170Q96K19 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC21.5■■□□□ 1.03
RNF170Q96K19 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
RNF170Q96K19 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RNF170Q96K19 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
RNF170Q96K19 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RNF170Q96K19 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.49■■□□□ 1.03
RNF170Q96K19 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RNF170Q96K19 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC21.49■■□□□ 1.03
RNF170Q96K19 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC21.49■■□□□ 1.03
RNF170Q96K19 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
RNF170Q96K19 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RNF170Q96K19 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RNF170Q96K19 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
RNF170Q96K19 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
RNF170Q96K19 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RNF170Q96K19 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
RNF170Q96K19 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
RNF170Q96K19 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC21.48■■□□□ 1.03
RNF170Q96K19 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
RNF170Q96K19 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.48■■□□□ 1.03
RNF170Q96K19 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.47■■□□□ 1.03
RNF170Q96K19 CHML-204ENST00000638121 920 ntTSL 2 BASIC21.47■■□□□ 1.03
RNF170Q96K19 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
RNF170Q96K19 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RNF170Q96K19 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
RNF170Q96K19 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
RNF170Q96K19 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
RNF170Q96K19 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RNF170Q96K19 ZNRF2P2-203ENST00000454624 420 ntBASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms