Protein–RNA interactions for Protein: Q96EE3

SEH1L, Nucleoporin SEH1, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEH1LQ96EE3 HES6-205ENST00000409356 528 ntTSL 2 BASIC21.23■□□□□ 0.99
SEH1LQ96EE3 GDI1-215ENST00000630693 786 ntTSL 4 BASIC21.23■□□□□ 0.99
SEH1LQ96EE3 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SEH1LQ96EE3 AC092803.2-201ENST00000564287 1899 ntBASIC21.23■□□□□ 0.99
SEH1LQ96EE3 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC21.23■□□□□ 0.99
SEH1LQ96EE3 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
SEH1LQ96EE3 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SEH1LQ96EE3 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SEH1LQ96EE3 MIR3648-2-201ENST00000581792 180 ntBASIC21.22■□□□□ 0.99
SEH1LQ96EE3 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC21.22■□□□□ 0.99
SEH1LQ96EE3 MIR3648-1-201ENST00000615959 180 ntBASIC21.22■□□□□ 0.99
SEH1LQ96EE3 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SEH1LQ96EE3 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SEH1LQ96EE3 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
SEH1LQ96EE3 AC016575.1-201ENST00000607026 382 ntBASIC21.21■□□□□ 0.99
SEH1LQ96EE3 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.21■□□□□ 0.99
SEH1LQ96EE3 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.21■□□□□ 0.99
SEH1LQ96EE3 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
SEH1LQ96EE3 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SEH1LQ96EE3 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SEH1LQ96EE3 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC21.2■□□□□ 0.98
SEH1LQ96EE3 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.2■□□□□ 0.98
SEH1LQ96EE3 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.2■□□□□ 0.98
SEH1LQ96EE3 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SEH1LQ96EE3 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC21.2■□□□□ 0.98
SEH1LQ96EE3 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
SEH1LQ96EE3 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
SEH1LQ96EE3 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SEH1LQ96EE3 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SEH1LQ96EE3 AC093323.1-202ENST00000635031 2045 ntBASIC21.19■□□□□ 0.98
SEH1LQ96EE3 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.19■□□□□ 0.98
SEH1LQ96EE3 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.19■□□□□ 0.98
SEH1LQ96EE3 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
SEH1LQ96EE3 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
SEH1LQ96EE3 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SEH1LQ96EE3 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.17■□□□□ 0.98
SEH1LQ96EE3 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
SEH1LQ96EE3 AGPS-202ENST00000409888 815 ntTSL 4 BASIC21.17■□□□□ 0.98
SEH1LQ96EE3 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SEH1LQ96EE3 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SEH1LQ96EE3 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SEH1LQ96EE3 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC21.16■□□□□ 0.98
SEH1LQ96EE3 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
SEH1LQ96EE3 MACF1-219ENST00000484793 834 ntTSL 2 BASIC21.16■□□□□ 0.98
SEH1LQ96EE3 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
SEH1LQ96EE3 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SEH1LQ96EE3 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
SEH1LQ96EE3 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SEH1LQ96EE3 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SEH1LQ96EE3 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
SEH1LQ96EE3 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SEH1LQ96EE3 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC21.14■□□□□ 0.98
SEH1LQ96EE3 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
SEH1LQ96EE3 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SEH1LQ96EE3 HLA-V-202ENST00000446817 847 ntBASIC21.14■□□□□ 0.97
SEH1LQ96EE3 RPS2-202ENST00000526522 924 ntTSL 2 BASIC21.14■□□□□ 0.97
SEH1LQ96EE3 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC21.14■□□□□ 0.97
SEH1LQ96EE3 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SEH1LQ96EE3 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SEH1LQ96EE3 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
SEH1LQ96EE3 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
SEH1LQ96EE3 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.13■□□□□ 0.97
SEH1LQ96EE3 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
SEH1LQ96EE3 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SEH1LQ96EE3 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SEH1LQ96EE3 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.13■□□□□ 0.97
SEH1LQ96EE3 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SEH1LQ96EE3 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
SEH1LQ96EE3 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SEH1LQ96EE3 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SEH1LQ96EE3 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC21.12■□□□□ 0.97
SEH1LQ96EE3 RPS2-210ENST00000530225 765 ntTSL 2 BASIC21.12■□□□□ 0.97
SEH1LQ96EE3 METRNL-202ENST00000570778 967 ntTSL 5 BASIC21.12■□□□□ 0.97
SEH1LQ96EE3 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SEH1LQ96EE3 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SEH1LQ96EE3 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SEH1LQ96EE3 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.12■□□□□ 0.97
SEH1LQ96EE3 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
SEH1LQ96EE3 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SEH1LQ96EE3 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.12■□□□□ 0.97
SEH1LQ96EE3 AP004609.3-201ENST00000610705 1884 ntBASIC21.11■□□□□ 0.97
SEH1LQ96EE3 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SEH1LQ96EE3 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SEH1LQ96EE3 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
SEH1LQ96EE3 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SEH1LQ96EE3 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC21.11■□□□□ 0.97
SEH1LQ96EE3 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SEH1LQ96EE3 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SEH1LQ96EE3 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SEH1LQ96EE3 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.1■□□□□ 0.97
SEH1LQ96EE3 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SEH1LQ96EE3 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
SEH1LQ96EE3 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SEH1LQ96EE3 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC21.1■□□□□ 0.97
SEH1LQ96EE3 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SEH1LQ96EE3 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SEH1LQ96EE3 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SEH1LQ96EE3 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SEH1LQ96EE3 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SEH1LQ96EE3 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms