Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC24.88■■□□□ 1.57
PTCD2Q8WV60 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
PTCD2Q8WV60 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC24.88■■□□□ 1.57
PTCD2Q8WV60 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
PTCD2Q8WV60 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
PTCD2Q8WV60 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC24.87■■□□□ 1.57
PTCD2Q8WV60 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
PTCD2Q8WV60 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC24.87■■□□□ 1.57
PTCD2Q8WV60 CEP120-209ENST00000515110 606 ntTSL 3 BASIC24.87■■□□□ 1.57
PTCD2Q8WV60 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC24.87■■□□□ 1.57
PTCD2Q8WV60 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
PTCD2Q8WV60 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC24.86■■□□□ 1.57
PTCD2Q8WV60 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC24.86■■□□□ 1.57
PTCD2Q8WV60 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
PTCD2Q8WV60 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
PTCD2Q8WV60 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
PTCD2Q8WV60 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
PTCD2Q8WV60 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC24.85■■□□□ 1.57
PTCD2Q8WV60 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC24.84■■□□□ 1.57
PTCD2Q8WV60 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC24.84■■□□□ 1.57
PTCD2Q8WV60 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC24.84■■□□□ 1.57
PTCD2Q8WV60 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC24.84■■□□□ 1.57
PTCD2Q8WV60 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
PTCD2Q8WV60 MED25-210ENST00000612854 801 ntTSL 5 BASIC24.83■■□□□ 1.57
PTCD2Q8WV60 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
PTCD2Q8WV60 MED25-214ENST00000622402 642 ntTSL 5 BASIC24.83■■□□□ 1.57
PTCD2Q8WV60 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.56
PTCD2Q8WV60 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC24.83■■□□□ 1.56
PTCD2Q8WV60 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC24.82■■□□□ 1.56
PTCD2Q8WV60 AC022413.1-201ENST00000624602 984 ntBASIC24.82■■□□□ 1.56
PTCD2Q8WV60 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
PTCD2Q8WV60 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC24.81■■□□□ 1.56
PTCD2Q8WV60 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC24.81■■□□□ 1.56
PTCD2Q8WV60 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC24.81■■□□□ 1.56
PTCD2Q8WV60 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
PTCD2Q8WV60 AC091060.1-201ENST00000623524 1766 ntBASIC24.81■■□□□ 1.56
PTCD2Q8WV60 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC24.81■■□□□ 1.56
PTCD2Q8WV60 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
PTCD2Q8WV60 SHF-207ENST00000560540 2062 ntTSL 5 BASIC24.81■■□□□ 1.56
PTCD2Q8WV60 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC24.8■■□□□ 1.56
PTCD2Q8WV60 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
PTCD2Q8WV60 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
PTCD2Q8WV60 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
PTCD2Q8WV60 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC24.79■■□□□ 1.56
PTCD2Q8WV60 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
PTCD2Q8WV60 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
PTCD2Q8WV60 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC24.79■■□□□ 1.56
PTCD2Q8WV60 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
PTCD2Q8WV60 AC060814.1-201ENST00000554326 538 ntBASIC24.78■■□□□ 1.56
PTCD2Q8WV60 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC24.78■■□□□ 1.56
PTCD2Q8WV60 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC24.77■■□□□ 1.56
PTCD2Q8WV60 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC24.77■■□□□ 1.56
PTCD2Q8WV60 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
PTCD2Q8WV60 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC24.77■■□□□ 1.56
PTCD2Q8WV60 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
PTCD2Q8WV60 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
PTCD2Q8WV60 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
PTCD2Q8WV60 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
PTCD2Q8WV60 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC24.76■■□□□ 1.55
PTCD2Q8WV60 RARRES2P2-201ENST00000394842 485 ntBASIC24.76■■□□□ 1.55
PTCD2Q8WV60 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC24.76■■□□□ 1.55
PTCD2Q8WV60 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC24.76■■□□□ 1.55
PTCD2Q8WV60 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
PTCD2Q8WV60 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
PTCD2Q8WV60 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC24.76■■□□□ 1.55
PTCD2Q8WV60 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC24.75■■□□□ 1.55
PTCD2Q8WV60 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
PTCD2Q8WV60 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
PTCD2Q8WV60 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC24.75■■□□□ 1.55
PTCD2Q8WV60 AC145676.1-201ENST00000514988 2004 ntBASIC24.75■■□□□ 1.55
PTCD2Q8WV60 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC24.75■■□□□ 1.55
PTCD2Q8WV60 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC24.74■■□□□ 1.55
PTCD2Q8WV60 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC24.74■■□□□ 1.55
PTCD2Q8WV60 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC24.74■■□□□ 1.55
PTCD2Q8WV60 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
PTCD2Q8WV60 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC24.74■■□□□ 1.55
PTCD2Q8WV60 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
PTCD2Q8WV60 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
PTCD2Q8WV60 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC24.73■■□□□ 1.55
PTCD2Q8WV60 RNF126P1-201ENST00000567452 1320 ntBASIC24.73■■□□□ 1.55
PTCD2Q8WV60 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC24.73■■□□□ 1.55
PTCD2Q8WV60 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
PTCD2Q8WV60 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
PTCD2Q8WV60 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
PTCD2Q8WV60 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
PTCD2Q8WV60 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC24.72■■□□□ 1.55
PTCD2Q8WV60 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
PTCD2Q8WV60 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC24.72■■□□□ 1.55
PTCD2Q8WV60 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
PTCD2Q8WV60 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC24.71■■□□□ 1.55
PTCD2Q8WV60 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
PTCD2Q8WV60 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC24.71■■□□□ 1.55
PTCD2Q8WV60 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC24.71■■□□□ 1.55
PTCD2Q8WV60 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
PTCD2Q8WV60 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
PTCD2Q8WV60 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
PTCD2Q8WV60 AC092803.2-201ENST00000564287 1899 ntBASIC24.7■■□□□ 1.55
PTCD2Q8WV60 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC24.7■■□□□ 1.55
PTCD2Q8WV60 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
PTCD2Q8WV60 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms