Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC7.49□□□□□ -1.21
SYNE1Q8NF91 RAP2CP1-202ENST00000605179 643 ntBASIC7.49□□□□□ -1.21
SYNE1Q8NF91 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC7.49□□□□□ -1.21
SYNE1Q8NF91 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC7.49□□□□□ -1.21
SYNE1Q8NF91 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
SYNE1Q8NF91 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
SYNE1Q8NF91 OR2A1-AS1-204ENST00000470435 602 ntBASIC7.49□□□□□ -1.21
SYNE1Q8NF91 BHLHE23-202ENST00000612929 1109 ntBASIC7.49□□□□□ -1.21
SYNE1Q8NF91 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
SYNE1Q8NF91 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
SYNE1Q8NF91 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC7.48□□□□□ -1.21
SYNE1Q8NF91 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
SYNE1Q8NF91 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
SYNE1Q8NF91 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC7.48□□□□□ -1.21
SYNE1Q8NF91 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC7.48□□□□□ -1.21
SYNE1Q8NF91 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
SYNE1Q8NF91 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
SYNE1Q8NF91 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC7.48□□□□□ -1.21
SYNE1Q8NF91 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
SYNE1Q8NF91 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
SYNE1Q8NF91 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC7.48□□□□□ -1.21
SYNE1Q8NF91 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
SYNE1Q8NF91 GUSBP5-201ENST00000418136 578 ntBASIC7.48□□□□□ -1.21
SYNE1Q8NF91 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC7.48□□□□□ -1.21
SYNE1Q8NF91 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
SYNE1Q8NF91 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
SYNE1Q8NF91 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC7.48□□□□□ -1.21
SYNE1Q8NF91 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
SYNE1Q8NF91 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC7.48□□□□□ -1.21
SYNE1Q8NF91 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC7.48□□□□□ -1.21
SYNE1Q8NF91 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
SYNE1Q8NF91 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
SYNE1Q8NF91 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC7.47□□□□□ -1.21
SYNE1Q8NF91 AC139795.1-202ENST00000500444 432 ntBASIC7.47□□□□□ -1.21
SYNE1Q8NF91 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC7.47□□□□□ -1.21
SYNE1Q8NF91 MTURN-203ENST00000409688 843 ntTSL 2 BASIC7.47□□□□□ -1.21
SYNE1Q8NF91 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
SYNE1Q8NF91 AP002414.2-202ENST00000590929 1450 ntBASIC7.47□□□□□ -1.21
SYNE1Q8NF91 BEX3-202ENST00000372634 753 ntTSL 2 BASIC7.47□□□□□ -1.21
SYNE1Q8NF91 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
SYNE1Q8NF91 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC7.47□□□□□ -1.21
SYNE1Q8NF91 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC7.47□□□□□ -1.21
SYNE1Q8NF91 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
SYNE1Q8NF91 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
SYNE1Q8NF91 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
SYNE1Q8NF91 AP004833.2-201ENST00000532228 1454 ntBASIC7.47□□□□□ -1.21
SYNE1Q8NF91 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
SYNE1Q8NF91 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC7.47□□□□□ -1.21
SYNE1Q8NF91 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
SYNE1Q8NF91 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC7.47□□□□□ -1.21
SYNE1Q8NF91 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
SYNE1Q8NF91 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.21
SYNE1Q8NF91 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC7.46□□□□□ -1.21
SYNE1Q8NF91 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC7.46□□□□□ -1.21
SYNE1Q8NF91 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC7.46□□□□□ -1.21
SYNE1Q8NF91 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
SYNE1Q8NF91 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
SYNE1Q8NF91 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC7.46□□□□□ -1.21
SYNE1Q8NF91 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
SYNE1Q8NF91 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC7.46□□□□□ -1.22
SYNE1Q8NF91 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
SYNE1Q8NF91 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC7.46□□□□□ -1.22
SYNE1Q8NF91 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC7.46□□□□□ -1.22
SYNE1Q8NF91 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
SYNE1Q8NF91 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC7.46□□□□□ -1.22
SYNE1Q8NF91 AC009299.2-201ENST00000482477 511 ntBASIC7.46□□□□□ -1.22
SYNE1Q8NF91 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC7.46□□□□□ -1.22
SYNE1Q8NF91 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC7.46□□□□□ -1.22
SYNE1Q8NF91 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
SYNE1Q8NF91 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC7.45□□□□□ -1.22
SYNE1Q8NF91 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
SYNE1Q8NF91 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
SYNE1Q8NF91 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
SYNE1Q8NF91 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
SYNE1Q8NF91 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC7.45□□□□□ -1.22
SYNE1Q8NF91 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
SYNE1Q8NF91 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
SYNE1Q8NF91 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC7.45□□□□□ -1.22
SYNE1Q8NF91 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC7.45□□□□□ -1.22
SYNE1Q8NF91 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
SYNE1Q8NF91 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
SYNE1Q8NF91 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
SYNE1Q8NF91 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC7.45□□□□□ -1.22
SYNE1Q8NF91 MIR3960-201ENST00000583311 91 ntBASIC7.45□□□□□ -1.22
SYNE1Q8NF91 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC7.44□□□□□ -1.22
SYNE1Q8NF91 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC7.44□□□□□ -1.22
SYNE1Q8NF91 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
SYNE1Q8NF91 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC7.44□□□□□ -1.22
SYNE1Q8NF91 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
SYNE1Q8NF91 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC7.44□□□□□ -1.22
SYNE1Q8NF91 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC7.44□□□□□ -1.22
SYNE1Q8NF91 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC7.44□□□□□ -1.22
SYNE1Q8NF91 AC074183.2-201ENST00000623112 922 ntBASIC7.44□□□□□ -1.22
SYNE1Q8NF91 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
SYNE1Q8NF91 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC7.44□□□□□ -1.22
SYNE1Q8NF91 AC018755.3-202ENST00000596210 929 ntBASIC7.44□□□□□ -1.22
SYNE1Q8NF91 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC7.44□□□□□ -1.22
SYNE1Q8NF91 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
SYNE1Q8NF91 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC7.44□□□□□ -1.22
SYNE1Q8NF91 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms