Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 AL157400.5-201ENST00000507624 621 ntBASIC20.3■□□□□ 0.84
C11orf42Q8N5U0 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC20.3■□□□□ 0.84
C11orf42Q8N5U0 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC20.3■□□□□ 0.84
C11orf42Q8N5U0 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.29■□□□□ 0.84
C11orf42Q8N5U0 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
C11orf42Q8N5U0 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
C11orf42Q8N5U0 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
C11orf42Q8N5U0 HSD17B1P1-201ENST00000590052 955 ntBASIC20.29■□□□□ 0.84
C11orf42Q8N5U0 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
C11orf42Q8N5U0 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
C11orf42Q8N5U0 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
C11orf42Q8N5U0 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
C11orf42Q8N5U0 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
C11orf42Q8N5U0 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
C11orf42Q8N5U0 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
C11orf42Q8N5U0 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC20.28■□□□□ 0.84
C11orf42Q8N5U0 MOB2-207ENST00000614710 705 ntTSL 5 BASIC20.28■□□□□ 0.84
C11orf42Q8N5U0 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
C11orf42Q8N5U0 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
C11orf42Q8N5U0 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
C11orf42Q8N5U0 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
C11orf42Q8N5U0 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
C11orf42Q8N5U0 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC20.27■□□□□ 0.83
C11orf42Q8N5U0 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
C11orf42Q8N5U0 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
C11orf42Q8N5U0 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
C11orf42Q8N5U0 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
C11orf42Q8N5U0 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
C11orf42Q8N5U0 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
C11orf42Q8N5U0 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
C11orf42Q8N5U0 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
C11orf42Q8N5U0 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC20.26■□□□□ 0.83
C11orf42Q8N5U0 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
C11orf42Q8N5U0 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.25■□□□□ 0.83
C11orf42Q8N5U0 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
C11orf42Q8N5U0 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC20.25■□□□□ 0.83
C11orf42Q8N5U0 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
C11orf42Q8N5U0 AL121749.1-202ENST00000609313 2153 ntBASIC20.25■□□□□ 0.83
C11orf42Q8N5U0 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
C11orf42Q8N5U0 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
C11orf42Q8N5U0 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC20.24■□□□□ 0.83
C11orf42Q8N5U0 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
C11orf42Q8N5U0 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC20.24■□□□□ 0.83
C11orf42Q8N5U0 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
C11orf42Q8N5U0 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
C11orf42Q8N5U0 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
C11orf42Q8N5U0 HES4-202ENST00000428771 1040 ntTSL 2 BASIC20.23■□□□□ 0.83
C11orf42Q8N5U0 ECEL1P2-201ENST00000461596 1295 ntBASIC20.23■□□□□ 0.83
C11orf42Q8N5U0 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC20.23■□□□□ 0.83
C11orf42Q8N5U0 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
C11orf42Q8N5U0 AL359504.2-201ENST00000605506 1601 ntBASIC20.23■□□□□ 0.83
C11orf42Q8N5U0 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
C11orf42Q8N5U0 RNF126P1-201ENST00000567452 1320 ntBASIC20.23■□□□□ 0.83
C11orf42Q8N5U0 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
C11orf42Q8N5U0 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
C11orf42Q8N5U0 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
C11orf42Q8N5U0 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC20.21■□□□□ 0.83
C11orf42Q8N5U0 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
C11orf42Q8N5U0 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
C11orf42Q8N5U0 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC20.21■□□□□ 0.83
C11orf42Q8N5U0 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
C11orf42Q8N5U0 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
C11orf42Q8N5U0 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC20.21■□□□□ 0.83
C11orf42Q8N5U0 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
C11orf42Q8N5U0 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.2■□□□□ 0.83
C11orf42Q8N5U0 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
C11orf42Q8N5U0 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
C11orf42Q8N5U0 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.2■□□□□ 0.82
C11orf42Q8N5U0 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
C11orf42Q8N5U0 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
C11orf42Q8N5U0 AC025884.2-201ENST00000553429 711 ntBASIC20.19■□□□□ 0.82
C11orf42Q8N5U0 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
C11orf42Q8N5U0 AP004609.3-201ENST00000610705 1884 ntBASIC20.19■□□□□ 0.82
C11orf42Q8N5U0 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
C11orf42Q8N5U0 AC142472.1-201ENST00000612013 1741 ntBASIC20.19■□□□□ 0.82
C11orf42Q8N5U0 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC20.18■□□□□ 0.82
C11orf42Q8N5U0 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
C11orf42Q8N5U0 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
C11orf42Q8N5U0 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
C11orf42Q8N5U0 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
C11orf42Q8N5U0 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
C11orf42Q8N5U0 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
C11orf42Q8N5U0 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC20.17■□□□□ 0.82
C11orf42Q8N5U0 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC20.17■□□□□ 0.82
C11orf42Q8N5U0 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC20.17■□□□□ 0.82
C11orf42Q8N5U0 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
C11orf42Q8N5U0 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
C11orf42Q8N5U0 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
C11orf42Q8N5U0 BRD4-212ENST00000630599 726 ntTSL 2 BASIC20.16■□□□□ 0.82
C11orf42Q8N5U0 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
C11orf42Q8N5U0 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
C11orf42Q8N5U0 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
C11orf42Q8N5U0 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
C11orf42Q8N5U0 RARRES2P2-201ENST00000394842 485 ntBASIC20.15■□□□□ 0.82
C11orf42Q8N5U0 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC20.15■□□□□ 0.82
C11orf42Q8N5U0 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.15■□□□□ 0.82
C11orf42Q8N5U0 SMPD5-203ENST00000639008 1464 ntBASIC20.15■□□□□ 0.82
C11orf42Q8N5U0 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
C11orf42Q8N5U0 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
C11orf42Q8N5U0 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms