Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CCDC25Q86WR0 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
CCDC25Q86WR0 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC25.13■■□□□ 1.61
CCDC25Q86WR0 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC25.13■■□□□ 1.61
CCDC25Q86WR0 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
CCDC25Q86WR0 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
CCDC25Q86WR0 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
CCDC25Q86WR0 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC25.13■■□□□ 1.61
CCDC25Q86WR0 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CCDC25Q86WR0 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
CCDC25Q86WR0 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
CCDC25Q86WR0 SNAI3-AS1-204ENST00000567997 2048 ntBASIC25.12■■□□□ 1.61
CCDC25Q86WR0 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
CCDC25Q86WR0 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CCDC25Q86WR0 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
CCDC25Q86WR0 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
CCDC25Q86WR0 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CCDC25Q86WR0 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC25.11■■□□□ 1.61
CCDC25Q86WR0 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
CCDC25Q86WR0 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC25.1■■□□□ 1.61
CCDC25Q86WR0 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC25.1■■□□□ 1.61
CCDC25Q86WR0 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CCDC25Q86WR0 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC25.1■■□□□ 1.61
CCDC25Q86WR0 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC25.1■■□□□ 1.61
CCDC25Q86WR0 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CCDC25Q86WR0 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CCDC25Q86WR0 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
CCDC25Q86WR0 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC25.09■■□□□ 1.61
CCDC25Q86WR0 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
CCDC25Q86WR0 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
CCDC25Q86WR0 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC25.09■■□□□ 1.61
CCDC25Q86WR0 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
CCDC25Q86WR0 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
CCDC25Q86WR0 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC25.08■■□□□ 1.61
CCDC25Q86WR0 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.61
CCDC25Q86WR0 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC25.08■■□□□ 1.61
CCDC25Q86WR0 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CCDC25Q86WR0 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
CCDC25Q86WR0 ERN1-208ENST00000606895 2068 ntBASIC25.08■■□□□ 1.6
CCDC25Q86WR0 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC25.07■■□□□ 1.6
CCDC25Q86WR0 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
CCDC25Q86WR0 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
CCDC25Q86WR0 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
CCDC25Q86WR0 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC25.07■■□□□ 1.6
CCDC25Q86WR0 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
CCDC25Q86WR0 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC25.06■■□□□ 1.6
CCDC25Q86WR0 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CCDC25Q86WR0 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
CCDC25Q86WR0 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC25.06■■□□□ 1.6
CCDC25Q86WR0 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
CCDC25Q86WR0 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CCDC25Q86WR0 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC25.05■■□□□ 1.6
CCDC25Q86WR0 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CCDC25Q86WR0 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC25.05■■□□□ 1.6
CCDC25Q86WR0 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC25.05■■□□□ 1.6
CCDC25Q86WR0 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
CCDC25Q86WR0 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
CCDC25Q86WR0 AP006261.1-201ENST00000584783 668 ntBASIC25.04■■□□□ 1.6
CCDC25Q86WR0 AC087741.3-201ENST00000624270 1347 ntBASIC25.04■■□□□ 1.6
CCDC25Q86WR0 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CCDC25Q86WR0 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
CCDC25Q86WR0 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
CCDC25Q86WR0 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
CCDC25Q86WR0 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC25.02■■□□□ 1.6
CCDC25Q86WR0 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CCDC25Q86WR0 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
CCDC25Q86WR0 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CCDC25Q86WR0 AC010501.1-201ENST00000606270 1962 ntBASIC25■■□□□ 1.59
CCDC25Q86WR0 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
CCDC25Q86WR0 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC25■■□□□ 1.59
CCDC25Q86WR0 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC25■■□□□ 1.59
CCDC25Q86WR0 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
CCDC25Q86WR0 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC25■■□□□ 1.59
CCDC25Q86WR0 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
CCDC25Q86WR0 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
CCDC25Q86WR0 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC24.99■■□□□ 1.59
CCDC25Q86WR0 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC24.98■■□□□ 1.59
CCDC25Q86WR0 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
CCDC25Q86WR0 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
CCDC25Q86WR0 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CCDC25Q86WR0 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CCDC25Q86WR0 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CCDC25Q86WR0 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC24.97■■□□□ 1.59
CCDC25Q86WR0 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
CCDC25Q86WR0 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC24.97■■□□□ 1.59
CCDC25Q86WR0 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC24.97■■□□□ 1.59
CCDC25Q86WR0 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC24.96■■□□□ 1.59
CCDC25Q86WR0 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC24.96■■□□□ 1.59
CCDC25Q86WR0 NRG1-221ENST00000614767 762 ntTSL 5 BASIC24.96■■□□□ 1.59
CCDC25Q86WR0 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
CCDC25Q86WR0 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
CCDC25Q86WR0 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
CCDC25Q86WR0 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
CCDC25Q86WR0 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC24.95■■□□□ 1.58
CCDC25Q86WR0 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.58
CCDC25Q86WR0 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.58
CCDC25Q86WR0 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC24.95■■□□□ 1.58
CCDC25Q86WR0 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC24.94■■□□□ 1.58
CCDC25Q86WR0 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC24.94■■□□□ 1.58
CCDC25Q86WR0 AC044849.2-201ENST00000606596 710 ntBASIC24.94■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms