Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CCDC25Q86WR0 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
CCDC25Q86WR0 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC25.13■■□□□ 1.61
CCDC25Q86WR0 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC25.13■■□□□ 1.61
CCDC25Q86WR0 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
CCDC25Q86WR0 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
CCDC25Q86WR0 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
CCDC25Q86WR0 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC25.13■■□□□ 1.61
CCDC25Q86WR0 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CCDC25Q86WR0 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
CCDC25Q86WR0 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
CCDC25Q86WR0 SNAI3-AS1-204ENST00000567997 2048 ntBASIC25.12■■□□□ 1.61
CCDC25Q86WR0 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
CCDC25Q86WR0 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CCDC25Q86WR0 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
CCDC25Q86WR0 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
CCDC25Q86WR0 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CCDC25Q86WR0 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC25.11■■□□□ 1.61
CCDC25Q86WR0 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
CCDC25Q86WR0 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC25.1■■□□□ 1.61
CCDC25Q86WR0 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC25.1■■□□□ 1.61
CCDC25Q86WR0 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CCDC25Q86WR0 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC25.1■■□□□ 1.61
CCDC25Q86WR0 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC25.1■■□□□ 1.61
CCDC25Q86WR0 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CCDC25Q86WR0 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CCDC25Q86WR0 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
CCDC25Q86WR0 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC25.09■■□□□ 1.61
CCDC25Q86WR0 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
CCDC25Q86WR0 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
CCDC25Q86WR0 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC25.09■■□□□ 1.61
CCDC25Q86WR0 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
CCDC25Q86WR0 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
CCDC25Q86WR0 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC25.08■■□□□ 1.61
CCDC25Q86WR0 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.61
CCDC25Q86WR0 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC25.08■■□□□ 1.61
CCDC25Q86WR0 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CCDC25Q86WR0 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
CCDC25Q86WR0 ERN1-208ENST00000606895 2068 ntBASIC25.08■■□□□ 1.6
CCDC25Q86WR0 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC25.07■■□□□ 1.6
CCDC25Q86WR0 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
CCDC25Q86WR0 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
CCDC25Q86WR0 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
CCDC25Q86WR0 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC25.07■■□□□ 1.6
CCDC25Q86WR0 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
CCDC25Q86WR0 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC25.06■■□□□ 1.6
CCDC25Q86WR0 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CCDC25Q86WR0 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
CCDC25Q86WR0 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC25.06■■□□□ 1.6
CCDC25Q86WR0 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
CCDC25Q86WR0 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CCDC25Q86WR0 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC25.05■■□□□ 1.6
CCDC25Q86WR0 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CCDC25Q86WR0 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC25.05■■□□□ 1.6
CCDC25Q86WR0 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC25.05■■□□□ 1.6
CCDC25Q86WR0 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
CCDC25Q86WR0 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
CCDC25Q86WR0 AP006261.1-201ENST00000584783 668 ntBASIC25.04■■□□□ 1.6
CCDC25Q86WR0 AC087741.3-201ENST00000624270 1347 ntBASIC25.04■■□□□ 1.6
CCDC25Q86WR0 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CCDC25Q86WR0 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
CCDC25Q86WR0 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
CCDC25Q86WR0 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
CCDC25Q86WR0 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC25.02■■□□□ 1.6
CCDC25Q86WR0 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CCDC25Q86WR0 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
CCDC25Q86WR0 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CCDC25Q86WR0 AC010501.1-201ENST00000606270 1962 ntBASIC25■■□□□ 1.59
CCDC25Q86WR0 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
CCDC25Q86WR0 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC25■■□□□ 1.59
CCDC25Q86WR0 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC25■■□□□ 1.59
CCDC25Q86WR0 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
CCDC25Q86WR0 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC25■■□□□ 1.59
CCDC25Q86WR0 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
CCDC25Q86WR0 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
CCDC25Q86WR0 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC24.99■■□□□ 1.59
CCDC25Q86WR0 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC24.98■■□□□ 1.59
CCDC25Q86WR0 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
CCDC25Q86WR0 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
CCDC25Q86WR0 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CCDC25Q86WR0 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CCDC25Q86WR0 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CCDC25Q86WR0 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC24.97■■□□□ 1.59
CCDC25Q86WR0 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
CCDC25Q86WR0 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC24.97■■□□□ 1.59
CCDC25Q86WR0 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC24.97■■□□□ 1.59
CCDC25Q86WR0 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC24.96■■□□□ 1.59
CCDC25Q86WR0 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC24.96■■□□□ 1.59
CCDC25Q86WR0 NRG1-221ENST00000614767 762 ntTSL 5 BASIC24.96■■□□□ 1.59
CCDC25Q86WR0 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
CCDC25Q86WR0 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
CCDC25Q86WR0 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
CCDC25Q86WR0 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
CCDC25Q86WR0 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC24.95■■□□□ 1.58
CCDC25Q86WR0 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.58
CCDC25Q86WR0 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.58
CCDC25Q86WR0 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC24.95■■□□□ 1.58
CCDC25Q86WR0 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC24.94■■□□□ 1.58
CCDC25Q86WR0 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC24.94■■□□□ 1.58
CCDC25Q86WR0 AC044849.2-201ENST00000606596 710 ntBASIC24.94■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms