Protein–RNA interactions for Protein: Q63HN8

RNF213, E3 ubiquitin-protein ligase RNF213, humanhuman

Predictions only

Length 5,207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213Q63HN8 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.23
RNF213Q63HN8 TRIR-202ENST00000588213 841 ntTSL 3 BASIC13.58□□□□□ -0.23
RNF213Q63HN8 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC13.58□□□□□ -0.24
RNF213Q63HN8 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
RNF213Q63HN8 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RNF213Q63HN8 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC13.58□□□□□ -0.24
RNF213Q63HN8 AL117332.1-201ENST00000622628 974 ntBASIC13.58□□□□□ -0.24
RNF213Q63HN8 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
RNF213Q63HN8 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RNF213Q63HN8 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RNF213Q63HN8 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
RNF213Q63HN8 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
RNF213Q63HN8 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
RNF213Q63HN8 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
RNF213Q63HN8 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
RNF213Q63HN8 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
RNF213Q63HN8 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
RNF213Q63HN8 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC13.56□□□□□ -0.24
RNF213Q63HN8 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RNF213Q63HN8 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RNF213Q63HN8 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC13.55□□□□□ -0.24
RNF213Q63HN8 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RNF213Q63HN8 AC135983.2-203ENST00000454486 1613 ntBASIC13.55□□□□□ -0.24
RNF213Q63HN8 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC13.55□□□□□ -0.24
RNF213Q63HN8 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
RNF213Q63HN8 PEX7-203ENST00000541292 945 ntTSL 5 BASIC13.55□□□□□ -0.24
RNF213Q63HN8 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
RNF213Q63HN8 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC13.55□□□□□ -0.24
RNF213Q63HN8 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC13.55□□□□□ -0.24
RNF213Q63HN8 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
RNF213Q63HN8 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC13.54□□□□□ -0.24
RNF213Q63HN8 ID1-201ENST00000376105 1233 ntBASIC13.54□□□□□ -0.24
RNF213Q63HN8 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC13.54□□□□□ -0.24
RNF213Q63HN8 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC13.54□□□□□ -0.24
RNF213Q63HN8 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC13.54□□□□□ -0.24
RNF213Q63HN8 AC105265.2-201ENST00000467189 838 ntBASIC13.54□□□□□ -0.24
RNF213Q63HN8 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC13.54□□□□□ -0.24
RNF213Q63HN8 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RNF213Q63HN8 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RNF213Q63HN8 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RNF213Q63HN8 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
RNF213Q63HN8 AC127502.1-201ENST00000399971 1502 ntBASIC13.53□□□□□ -0.24
RNF213Q63HN8 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
RNF213Q63HN8 HYI-206ENST00000372434 1025 ntTSL 5 BASIC13.53□□□□□ -0.24
RNF213Q63HN8 AC106739.1-201ENST00000617035 715 ntBASIC13.53□□□□□ -0.24
RNF213Q63HN8 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RNF213Q63HN8 MTX2-204ENST00000443241 799 ntTSL 3 BASIC13.53□□□□□ -0.24
RNF213Q63HN8 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC13.52□□□□□ -0.24
RNF213Q63HN8 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
RNF213Q63HN8 AC093536.1-201ENST00000569153 554 ntBASIC13.52□□□□□ -0.24
RNF213Q63HN8 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC13.52□□□□□ -0.25
RNF213Q63HN8 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RNF213Q63HN8 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC13.52□□□□□ -0.25
RNF213Q63HN8 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC13.52□□□□□ -0.25
RNF213Q63HN8 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
RNF213Q63HN8 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC13.51□□□□□ -0.25
RNF213Q63HN8 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
RNF213Q63HN8 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RNF213Q63HN8 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
RNF213Q63HN8 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RNF213Q63HN8 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RNF213Q63HN8 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RNF213Q63HN8 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RNF213Q63HN8 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC13.51□□□□□ -0.25
RNF213Q63HN8 IDNK-203ENST00000405990 629 ntTSL 2 BASIC13.5□□□□□ -0.25
RNF213Q63HN8 AC021242.3-201ENST00000607598 1377 ntBASIC13.5□□□□□ -0.25
RNF213Q63HN8 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RNF213Q63HN8 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
RNF213Q63HN8 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
RNF213Q63HN8 AC019171.1-201ENST00000601251 1056 ntBASIC13.5□□□□□ -0.25
RNF213Q63HN8 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RNF213Q63HN8 TSPY9P-201ENST00000440215 945 ntBASIC13.49□□□□□ -0.25
RNF213Q63HN8 TSPY11P-201ENST00000442607 1045 ntBASIC13.49□□□□□ -0.25
RNF213Q63HN8 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RNF213Q63HN8 AC010864.1-201ENST00000609407 1511 ntBASIC13.49□□□□□ -0.25
RNF213Q63HN8 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RNF213Q63HN8 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RNF213Q63HN8 RASSF1-AS1-201ENST00000629828 790 ntBASIC13.49□□□□□ -0.25
RNF213Q63HN8 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC13.49□□□□□ -0.25
RNF213Q63HN8 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RNF213Q63HN8 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RNF213Q63HN8 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RNF213Q63HN8 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
RNF213Q63HN8 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
RNF213Q63HN8 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
RNF213Q63HN8 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RNF213Q63HN8 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC13.48□□□□□ -0.25
RNF213Q63HN8 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
RNF213Q63HN8 AL359258.2-201ENST00000564063 1566 ntBASIC13.48□□□□□ -0.25
RNF213Q63HN8 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
RNF213Q63HN8 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
RNF213Q63HN8 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RNF213Q63HN8 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
RNF213Q63HN8 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC13.47□□□□□ -0.25
RNF213Q63HN8 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC13.47□□□□□ -0.25
RNF213Q63HN8 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RNF213Q63HN8 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC13.47□□□□□ -0.25
RNF213Q63HN8 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RNF213Q63HN8 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RNF213Q63HN8 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms