Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
LRRK2Q5S007 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
LRRK2Q5S007 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.93■■□□□ 1.1
LRRK2Q5S007 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC21.92■■□□□ 1.1
LRRK2Q5S007 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LRRK2Q5S007 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.92■■□□□ 1.1
LRRK2Q5S007 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
LRRK2Q5S007 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
LRRK2Q5S007 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC21.91■■□□□ 1.1
LRRK2Q5S007 RARRES2P6-201ENST00000567333 442 ntBASIC21.91■■□□□ 1.1
LRRK2Q5S007 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
LRRK2Q5S007 AC104564.3-201ENST00000582367 638 ntBASIC21.91■■□□□ 1.1
LRRK2Q5S007 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LRRK2Q5S007 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LRRK2Q5S007 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
LRRK2Q5S007 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
LRRK2Q5S007 KRT16P3-201ENST00000439127 1283 ntBASIC21.9■■□□□ 1.1
LRRK2Q5S007 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.9■■□□□ 1.1
LRRK2Q5S007 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.9■■□□□ 1.1
LRRK2Q5S007 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LRRK2Q5S007 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LRRK2Q5S007 BX664725.1-201ENST00000438252 379 ntBASIC21.9■■□□□ 1.1
LRRK2Q5S007 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC21.9■■□□□ 1.1
LRRK2Q5S007 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
LRRK2Q5S007 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC21.89■■□□□ 1.1
LRRK2Q5S007 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
LRRK2Q5S007 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
LRRK2Q5S007 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
LRRK2Q5S007 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.89■■□□□ 1.09
LRRK2Q5S007 MIR3960-201ENST00000583311 91 ntBASIC21.89■■□□□ 1.09
LRRK2Q5S007 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
LRRK2Q5S007 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
LRRK2Q5S007 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
LRRK2Q5S007 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
LRRK2Q5S007 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
LRRK2Q5S007 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
LRRK2Q5S007 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
LRRK2Q5S007 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
LRRK2Q5S007 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.87■■□□□ 1.09
LRRK2Q5S007 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
LRRK2Q5S007 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
LRRK2Q5S007 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
LRRK2Q5S007 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.87■■□□□ 1.09
LRRK2Q5S007 ZNRF2P3-201ENST00000424200 374 ntBASIC21.86■■□□□ 1.09
LRRK2Q5S007 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
LRRK2Q5S007 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
LRRK2Q5S007 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
LRRK2Q5S007 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC21.86■■□□□ 1.09
LRRK2Q5S007 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
LRRK2Q5S007 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
LRRK2Q5S007 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC21.85■■□□□ 1.09
LRRK2Q5S007 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LRRK2Q5S007 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LRRK2Q5S007 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LRRK2Q5S007 EBPL-204ENST00000378272 766 ntTSL 3 BASIC21.83■■□□□ 1.09
LRRK2Q5S007 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
LRRK2Q5S007 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC21.83■■□□□ 1.09
LRRK2Q5S007 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC21.83■■□□□ 1.09
LRRK2Q5S007 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
LRRK2Q5S007 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
LRRK2Q5S007 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.83■■□□□ 1.09
LRRK2Q5S007 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
LRRK2Q5S007 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.83■■□□□ 1.09
LRRK2Q5S007 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
LRRK2Q5S007 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
LRRK2Q5S007 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC21.82■■□□□ 1.08
LRRK2Q5S007 AC133561.4-201ENST00000566112 224 ntBASIC21.82■■□□□ 1.08
LRRK2Q5S007 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
LRRK2Q5S007 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC21.82■■□□□ 1.08
LRRK2Q5S007 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LRRK2Q5S007 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC21.81■■□□□ 1.08
LRRK2Q5S007 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC21.81■■□□□ 1.08
LRRK2Q5S007 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LRRK2Q5S007 GUK1-205ENST00000366722 850 ntTSL 3 BASIC21.81■■□□□ 1.08
LRRK2Q5S007 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
LRRK2Q5S007 AC022616.5-201ENST00000518796 181 ntBASIC21.81■■□□□ 1.08
LRRK2Q5S007 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
LRRK2Q5S007 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC21.81■■□□□ 1.08
LRRK2Q5S007 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LRRK2Q5S007 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC21.8■■□□□ 1.08
LRRK2Q5S007 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC21.8■■□□□ 1.08
LRRK2Q5S007 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LRRK2Q5S007 MIR5787-201ENST00000611784 55 ntBASIC21.8■■□□□ 1.08
LRRK2Q5S007 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
LRRK2Q5S007 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC21.79■■□□□ 1.08
LRRK2Q5S007 AC087393.1-201ENST00000582896 145 ntBASIC21.79■■□□□ 1.08
LRRK2Q5S007 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.79■■□□□ 1.08
LRRK2Q5S007 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LRRK2Q5S007 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.79■■□□□ 1.08
LRRK2Q5S007 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
LRRK2Q5S007 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.79■■□□□ 1.08
LRRK2Q5S007 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
LRRK2Q5S007 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
LRRK2Q5S007 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC21.78■■□□□ 1.08
LRRK2Q5S007 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LRRK2Q5S007 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
LRRK2Q5S007 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
LRRK2Q5S007 AC096631.2-201ENST00000436136 790 ntBASIC21.76■■□□□ 1.07
LRRK2Q5S007 MIR4466-201ENST00000606121 54 ntBASIC21.76■■□□□ 1.07
LRRK2Q5S007 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms