Protein–RNA interactions for Protein: Q49AH0

CDNF, Cerebral dopamine neurotrophic factor, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDNFQ49AH0 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDNFQ49AH0 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDNFQ49AH0 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDNFQ49AH0 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.9■□□□□ 0.94
CDNFQ49AH0 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDNFQ49AH0 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC20.9■□□□□ 0.94
CDNFQ49AH0 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CDNFQ49AH0 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
CDNFQ49AH0 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDNFQ49AH0 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CDNFQ49AH0 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
CDNFQ49AH0 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDNFQ49AH0 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
CDNFQ49AH0 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC20.89■□□□□ 0.93
CDNFQ49AH0 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDNFQ49AH0 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.89■□□□□ 0.93
CDNFQ49AH0 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC20.89■□□□□ 0.93
CDNFQ49AH0 WHAMMP3-201ENST00000611636 1609 ntBASIC20.89■□□□□ 0.93
CDNFQ49AH0 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CDNFQ49AH0 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDNFQ49AH0 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC20.88■□□□□ 0.93
CDNFQ49AH0 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDNFQ49AH0 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CDNFQ49AH0 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDNFQ49AH0 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDNFQ49AH0 AC110285.7-201ENST00000624417 1536 ntBASIC20.87■□□□□ 0.93
CDNFQ49AH0 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CDNFQ49AH0 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDNFQ49AH0 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDNFQ49AH0 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CDNFQ49AH0 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDNFQ49AH0 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
CDNFQ49AH0 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CDNFQ49AH0 DUX4L28-201ENST00000623687 678 ntBASIC20.86■□□□□ 0.93
CDNFQ49AH0 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC20.86■□□□□ 0.93
CDNFQ49AH0 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDNFQ49AH0 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDNFQ49AH0 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20.85■□□□□ 0.93
CDNFQ49AH0 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CDNFQ49AH0 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC20.85■□□□□ 0.93
CDNFQ49AH0 PEX7-203ENST00000541292 945 ntTSL 5 BASIC20.85■□□□□ 0.93
CDNFQ49AH0 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
CDNFQ49AH0 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CDNFQ49AH0 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CDNFQ49AH0 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CDNFQ49AH0 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CDNFQ49AH0 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDNFQ49AH0 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CDNFQ49AH0 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDNFQ49AH0 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CDNFQ49AH0 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CDNFQ49AH0 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
CDNFQ49AH0 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CDNFQ49AH0 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CDNFQ49AH0 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CDNFQ49AH0 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CDNFQ49AH0 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.83■□□□□ 0.92
CDNFQ49AH0 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
CDNFQ49AH0 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CDNFQ49AH0 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.92
CDNFQ49AH0 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
CDNFQ49AH0 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
CDNFQ49AH0 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDNFQ49AH0 CIB2-204ENST00000557846 934 ntTSL 3 BASIC20.82■□□□□ 0.92
CDNFQ49AH0 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDNFQ49AH0 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDNFQ49AH0 ERN1-208ENST00000606895 2068 ntBASIC20.82■□□□□ 0.92
CDNFQ49AH0 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CDNFQ49AH0 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC20.81■□□□□ 0.92
CDNFQ49AH0 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC20.81■□□□□ 0.92
CDNFQ49AH0 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CDNFQ49AH0 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDNFQ49AH0 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDNFQ49AH0 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDNFQ49AH0 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.8■□□□□ 0.92
CDNFQ49AH0 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.8■□□□□ 0.92
CDNFQ49AH0 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDNFQ49AH0 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CDNFQ49AH0 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
CDNFQ49AH0 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.79■□□□□ 0.92
CDNFQ49AH0 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.79■□□□□ 0.92
CDNFQ49AH0 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC20.79■□□□□ 0.92
CDNFQ49AH0 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDNFQ49AH0 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC20.79■□□□□ 0.92
CDNFQ49AH0 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDNFQ49AH0 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDNFQ49AH0 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDNFQ49AH0 AC010501.1-201ENST00000606270 1962 ntBASIC20.79■□□□□ 0.92
CDNFQ49AH0 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CDNFQ49AH0 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDNFQ49AH0 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDNFQ49AH0 MIR3665-201ENST00000578708 105 ntBASIC20.78■□□□□ 0.92
CDNFQ49AH0 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDNFQ49AH0 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC20.77■□□□□ 0.92
CDNFQ49AH0 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDNFQ49AH0 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC20.76■□□□□ 0.91
CDNFQ49AH0 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDNFQ49AH0 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CDNFQ49AH0 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.75■□□□□ 0.91
CDNFQ49AH0 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms