Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SPCS3P61009 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SPCS3P61009 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SPCS3P61009 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SPCS3P61009 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
SPCS3P61009 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC19.77■□□□□ 0.76
SPCS3P61009 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SPCS3P61009 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SPCS3P61009 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
SPCS3P61009 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SPCS3P61009 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC19.76■□□□□ 0.75
SPCS3P61009 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SPCS3P61009 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SPCS3P61009 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SPCS3P61009 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SPCS3P61009 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SPCS3P61009 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SPCS3P61009 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SPCS3P61009 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
SPCS3P61009 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SPCS3P61009 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SPCS3P61009 AC087741.3-201ENST00000624270 1347 ntBASIC19.75■□□□□ 0.75
SPCS3P61009 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC19.75■□□□□ 0.75
SPCS3P61009 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
SPCS3P61009 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SPCS3P61009 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC19.74■□□□□ 0.75
SPCS3P61009 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SPCS3P61009 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SPCS3P61009 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
SPCS3P61009 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SPCS3P61009 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC19.73■□□□□ 0.75
SPCS3P61009 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
SPCS3P61009 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SPCS3P61009 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC19.73■□□□□ 0.75
SPCS3P61009 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC19.73■□□□□ 0.75
SPCS3P61009 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC19.73■□□□□ 0.75
SPCS3P61009 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SPCS3P61009 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC19.73■□□□□ 0.75
SPCS3P61009 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
SPCS3P61009 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SPCS3P61009 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
SPCS3P61009 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC19.72■□□□□ 0.75
SPCS3P61009 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SPCS3P61009 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SPCS3P61009 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SPCS3P61009 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
SPCS3P61009 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SPCS3P61009 AC044849.2-201ENST00000606596 710 ntBASIC19.71■□□□□ 0.75
SPCS3P61009 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SPCS3P61009 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SPCS3P61009 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SPCS3P61009 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC19.7■□□□□ 0.74
SPCS3P61009 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SPCS3P61009 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SPCS3P61009 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC19.7■□□□□ 0.74
SPCS3P61009 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SPCS3P61009 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SPCS3P61009 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SPCS3P61009 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SPCS3P61009 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
SPCS3P61009 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SPCS3P61009 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SPCS3P61009 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SPCS3P61009 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SPCS3P61009 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC19.68■□□□□ 0.74
SPCS3P61009 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC19.68■□□□□ 0.74
SPCS3P61009 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SPCS3P61009 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SPCS3P61009 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC19.67■□□□□ 0.74
SPCS3P61009 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC19.67■□□□□ 0.74
SPCS3P61009 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SPCS3P61009 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
SPCS3P61009 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SPCS3P61009 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SPCS3P61009 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
SPCS3P61009 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SPCS3P61009 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SPCS3P61009 RPS2-210ENST00000530225 765 ntTSL 2 BASIC19.66■□□□□ 0.74
SPCS3P61009 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SPCS3P61009 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
SPCS3P61009 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SPCS3P61009 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC19.65■□□□□ 0.74
SPCS3P61009 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SPCS3P61009 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
SPCS3P61009 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC19.65■□□□□ 0.74
SPCS3P61009 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SPCS3P61009 BOD1-206ENST00000480951 814 ntTSL 2 BASIC19.65■□□□□ 0.74
SPCS3P61009 NRG1-221ENST00000614767 762 ntTSL 5 BASIC19.65■□□□□ 0.74
SPCS3P61009 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
SPCS3P61009 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
SPCS3P61009 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
SPCS3P61009 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
SPCS3P61009 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
SPCS3P61009 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SPCS3P61009 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC19.64■□□□□ 0.73
SPCS3P61009 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
SPCS3P61009 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SPCS3P61009 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SPCS3P61009 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
SPCS3P61009 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms