Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATP1B3P54709 DUX4L11-201ENST00000611504 1267 ntBASIC21.1■□□□□ 0.97
ATP1B3P54709 DUX4L12-201ENST00000614593 1267 ntBASIC21.1■□□□□ 0.97
ATP1B3P54709 DUX4L14-201ENST00000621227 1267 ntBASIC21.1■□□□□ 0.97
ATP1B3P54709 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATP1B3P54709 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATP1B3P54709 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.09■□□□□ 0.97
ATP1B3P54709 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.09■□□□□ 0.97
ATP1B3P54709 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC21.09■□□□□ 0.97
ATP1B3P54709 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
ATP1B3P54709 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
ATP1B3P54709 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATP1B3P54709 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATP1B3P54709 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC21.09■□□□□ 0.97
ATP1B3P54709 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATP1B3P54709 AC020928.2-201ENST00000588717 2197 ntBASIC21.09■□□□□ 0.97
ATP1B3P54709 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.09■□□□□ 0.97
ATP1B3P54709 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
ATP1B3P54709 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ATP1B3P54709 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ATP1B3P54709 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
ATP1B3P54709 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.08■□□□□ 0.96
ATP1B3P54709 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ATP1B3P54709 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ATP1B3P54709 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
ATP1B3P54709 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
ATP1B3P54709 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC21.07■□□□□ 0.96
ATP1B3P54709 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ATP1B3P54709 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
ATP1B3P54709 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ATP1B3P54709 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.06■□□□□ 0.96
ATP1B3P54709 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.06■□□□□ 0.96
ATP1B3P54709 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC21.06■□□□□ 0.96
ATP1B3P54709 AC092803.2-201ENST00000564287 1899 ntBASIC21.05■□□□□ 0.96
ATP1B3P54709 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ATP1B3P54709 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ATP1B3P54709 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ATP1B3P54709 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ATP1B3P54709 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ATP1B3P54709 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC21.05■□□□□ 0.96
ATP1B3P54709 ZNRF2P2-203ENST00000454624 420 ntBASIC21.05■□□□□ 0.96
ATP1B3P54709 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
ATP1B3P54709 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ATP1B3P54709 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
ATP1B3P54709 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ATP1B3P54709 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC21.04■□□□□ 0.96
ATP1B3P54709 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC21.04■□□□□ 0.96
ATP1B3P54709 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC21.04■□□□□ 0.96
ATP1B3P54709 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ATP1B3P54709 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ATP1B3P54709 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ATP1B3P54709 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC21.03■□□□□ 0.96
ATP1B3P54709 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ATP1B3P54709 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ATP1B3P54709 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
ATP1B3P54709 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC21.03■□□□□ 0.96
ATP1B3P54709 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ATP1B3P54709 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC21.03■□□□□ 0.96
ATP1B3P54709 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.03■□□□□ 0.96
ATP1B3P54709 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ATP1B3P54709 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ATP1B3P54709 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC21.03■□□□□ 0.96
ATP1B3P54709 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
ATP1B3P54709 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ATP1B3P54709 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ATP1B3P54709 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC21.02■□□□□ 0.96
ATP1B3P54709 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
ATP1B3P54709 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC21.02■□□□□ 0.95
ATP1B3P54709 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ATP1B3P54709 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
ATP1B3P54709 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
ATP1B3P54709 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
ATP1B3P54709 HES6-205ENST00000409356 528 ntTSL 2 BASIC21.01■□□□□ 0.95
ATP1B3P54709 AC148477.6-201ENST00000623746 465 ntBASIC21.01■□□□□ 0.95
ATP1B3P54709 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ATP1B3P54709 MIR219A2-201ENST00000608502 1504 ntBASIC21■□□□□ 0.95
ATP1B3P54709 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21■□□□□ 0.95
ATP1B3P54709 AGPS-202ENST00000409888 815 ntTSL 4 BASIC21■□□□□ 0.95
ATP1B3P54709 DUSP8P4-201ENST00000399538 1761 ntBASIC21■□□□□ 0.95
ATP1B3P54709 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ATP1B3P54709 AC093323.1-202ENST00000635031 2045 ntBASIC20.99■□□□□ 0.95
ATP1B3P54709 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ATP1B3P54709 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
ATP1B3P54709 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ATP1B3P54709 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC20.99■□□□□ 0.95
ATP1B3P54709 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
ATP1B3P54709 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ATP1B3P54709 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ATP1B3P54709 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ATP1B3P54709 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ATP1B3P54709 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ATP1B3P54709 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC20.99■□□□□ 0.95
ATP1B3P54709 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
ATP1B3P54709 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
ATP1B3P54709 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ATP1B3P54709 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC20.98■□□□□ 0.95
ATP1B3P54709 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC20.98■□□□□ 0.95
ATP1B3P54709 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ATP1B3P54709 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ATP1B3P54709 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms