Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
CAPN1P07384 RARRES2P2-201ENST00000394842 485 ntBASIC24.04■■□□□ 1.44
CAPN1P07384 AP004609.3-201ENST00000610705 1884 ntBASIC24.04■■□□□ 1.44
CAPN1P07384 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC24.04■■□□□ 1.44
CAPN1P07384 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC24.04■■□□□ 1.44
CAPN1P07384 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC24.04■■□□□ 1.44
CAPN1P07384 AC091060.1-201ENST00000623524 1766 ntBASIC24.03■■□□□ 1.44
CAPN1P07384 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC24.03■■□□□ 1.44
CAPN1P07384 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CAPN1P07384 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CAPN1P07384 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC24.03■■□□□ 1.44
CAPN1P07384 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
CAPN1P07384 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CAPN1P07384 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CAPN1P07384 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC24.02■■□□□ 1.44
CAPN1P07384 RPS2-210ENST00000530225 765 ntTSL 2 BASIC24.02■■□□□ 1.44
CAPN1P07384 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.43
CAPN1P07384 CEP120-209ENST00000515110 606 ntTSL 3 BASIC24.01■■□□□ 1.43
CAPN1P07384 AC148477.6-201ENST00000623746 465 ntBASIC24.01■■□□□ 1.43
CAPN1P07384 RNF126P1-201ENST00000567452 1320 ntBASIC24.01■■□□□ 1.43
CAPN1P07384 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
CAPN1P07384 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC24■■□□□ 1.43
CAPN1P07384 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CAPN1P07384 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC24■■□□□ 1.43
CAPN1P07384 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CAPN1P07384 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC24■■□□□ 1.43
CAPN1P07384 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC24■■□□□ 1.43
CAPN1P07384 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC23.99■■□□□ 1.43
CAPN1P07384 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC23.99■■□□□ 1.43
CAPN1P07384 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC23.99■■□□□ 1.43
CAPN1P07384 WHAMMP3-201ENST00000611636 1609 ntBASIC23.99■■□□□ 1.43
CAPN1P07384 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CAPN1P07384 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC23.98■■□□□ 1.43
CAPN1P07384 AC022413.1-201ENST00000624602 984 ntBASIC23.98■■□□□ 1.43
CAPN1P07384 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CAPN1P07384 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC23.98■■□□□ 1.43
CAPN1P07384 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC23.97■■□□□ 1.43
CAPN1P07384 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC23.97■■□□□ 1.43
CAPN1P07384 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC23.97■■□□□ 1.43
CAPN1P07384 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CAPN1P07384 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC23.95■■□□□ 1.42
CAPN1P07384 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC23.95■■□□□ 1.42
CAPN1P07384 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC23.95■■□□□ 1.42
CAPN1P07384 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CAPN1P07384 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CAPN1P07384 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
CAPN1P07384 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CAPN1P07384 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
CAPN1P07384 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
CAPN1P07384 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC23.93■■□□□ 1.42
CAPN1P07384 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC23.93■■□□□ 1.42
CAPN1P07384 MIR219A2-201ENST00000608502 1504 ntBASIC23.93■■□□□ 1.42
CAPN1P07384 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CAPN1P07384 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC23.92■■□□□ 1.42
CAPN1P07384 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC23.92■■□□□ 1.42
CAPN1P07384 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CAPN1P07384 AC142472.1-201ENST00000612013 1741 ntBASIC23.92■■□□□ 1.42
CAPN1P07384 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CAPN1P07384 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
CAPN1P07384 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
CAPN1P07384 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
CAPN1P07384 ABHD17AP5-201ENST00000580133 923 ntBASIC23.91■■□□□ 1.42
CAPN1P07384 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CAPN1P07384 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
CAPN1P07384 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CAPN1P07384 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
CAPN1P07384 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC23.9■■□□□ 1.42
CAPN1P07384 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC23.9■■□□□ 1.42
CAPN1P07384 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC23.9■■□□□ 1.42
CAPN1P07384 AC145676.1-201ENST00000514988 2004 ntBASIC23.9■■□□□ 1.42
CAPN1P07384 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
CAPN1P07384 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
CAPN1P07384 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC23.9■■□□□ 1.42
CAPN1P07384 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
CAPN1P07384 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
CAPN1P07384 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC23.89■■□□□ 1.41
CAPN1P07384 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CAPN1P07384 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
CAPN1P07384 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
CAPN1P07384 AC060814.1-201ENST00000554326 538 ntBASIC23.88■■□□□ 1.41
CAPN1P07384 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
CAPN1P07384 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CAPN1P07384 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CAPN1P07384 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CAPN1P07384 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CAPN1P07384 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CAPN1P07384 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
CAPN1P07384 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CAPN1P07384 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CAPN1P07384 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CAPN1P07384 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
CAPN1P07384 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CAPN1P07384 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC23.87■■□□□ 1.41
CAPN1P07384 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
CAPN1P07384 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC23.86■■□□□ 1.41
CAPN1P07384 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
CAPN1P07384 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
CAPN1P07384 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC23.85■■□□□ 1.41
CAPN1P07384 AC092803.2-201ENST00000564287 1899 ntBASIC23.85■■□□□ 1.41
CAPN1P07384 HES4-202ENST00000428771 1040 ntTSL 2 BASIC23.85■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms