Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC33.15■■■□□ 2.9
COL5A2P05997 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
COL5A2P05997 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC33.14■■■□□ 2.9
COL5A2P05997 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC33.14■■■□□ 2.9
COL5A2P05997 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC33.14■■■□□ 2.9
COL5A2P05997 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC33.13■■■□□ 2.89
COL5A2P05997 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
COL5A2P05997 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC33.12■■■□□ 2.89
COL5A2P05997 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC33.12■■■□□ 2.89
COL5A2P05997 AP002414.2-202ENST00000590929 1450 ntBASIC33.12■■■□□ 2.89
COL5A2P05997 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC33.12■■■□□ 2.89
COL5A2P05997 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC33.11■■■□□ 2.89
COL5A2P05997 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC33.11■■■□□ 2.89
COL5A2P05997 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
COL5A2P05997 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
COL5A2P05997 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
COL5A2P05997 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
COL5A2P05997 AL359504.2-201ENST00000605506 1601 ntBASIC33.09■■■□□ 2.89
COL5A2P05997 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC33.09■■■□□ 2.89
COL5A2P05997 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC33.08■■■□□ 2.89
COL5A2P05997 MTX2-204ENST00000443241 799 ntTSL 3 BASIC33.08■■■□□ 2.89
COL5A2P05997 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC33.08■■■□□ 2.89
COL5A2P05997 ABCB10P3-201ENST00000561950 2166 ntBASIC33.08■■■□□ 2.89
COL5A2P05997 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC33.07■■■□□ 2.88
COL5A2P05997 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC33.06■■■□□ 2.88
COL5A2P05997 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
COL5A2P05997 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC33.05■■■□□ 2.88
COL5A2P05997 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC33.05■■■□□ 2.88
COL5A2P05997 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC33.05■■■□□ 2.88
COL5A2P05997 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
COL5A2P05997 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
COL5A2P05997 AC019171.1-201ENST00000601251 1056 ntBASIC33.04■■■□□ 2.88
COL5A2P05997 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC33.04■■■□□ 2.88
COL5A2P05997 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
COL5A2P05997 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC33.02■■■□□ 2.88
COL5A2P05997 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC33.02■■■□□ 2.88
COL5A2P05997 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC33.02■■■□□ 2.88
COL5A2P05997 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
COL5A2P05997 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
COL5A2P05997 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC33.01■■■□□ 2.88
COL5A2P05997 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC33.01■■■□□ 2.88
COL5A2P05997 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC33.01■■■□□ 2.88
COL5A2P05997 RNF146-205ENST00000477776 762 ntTSL 3 BASIC33■■■□□ 2.87
COL5A2P05997 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC33■■■□□ 2.87
COL5A2P05997 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC33■■■□□ 2.87
COL5A2P05997 AL139393.2-201ENST00000608721 2025 ntBASIC33■■■□□ 2.87
COL5A2P05997 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC33■■■□□ 2.87
COL5A2P05997 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC32.99■■■□□ 2.87
COL5A2P05997 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC32.99■■■□□ 2.87
COL5A2P05997 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC32.99■■■□□ 2.87
COL5A2P05997 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC32.99■■■□□ 2.87
COL5A2P05997 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
COL5A2P05997 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC32.98■■■□□ 2.87
COL5A2P05997 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC32.98■■■□□ 2.87
COL5A2P05997 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
COL5A2P05997 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
COL5A2P05997 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC32.97■■■□□ 2.87
COL5A2P05997 AC087393.1-201ENST00000582896 145 ntBASIC32.97■■■□□ 2.87
COL5A2P05997 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
COL5A2P05997 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC32.96■■■□□ 2.87
COL5A2P05997 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC32.96■■■□□ 2.87
COL5A2P05997 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
COL5A2P05997 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.87
COL5A2P05997 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC32.95■■■□□ 2.87
COL5A2P05997 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC32.95■■■□□ 2.87
COL5A2P05997 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC32.94■■■□□ 2.86
COL5A2P05997 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC32.94■■■□□ 2.86
COL5A2P05997 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC32.94■■■□□ 2.86
COL5A2P05997 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
COL5A2P05997 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC32.94■■■□□ 2.86
COL5A2P05997 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
COL5A2P05997 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
COL5A2P05997 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
COL5A2P05997 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC32.93■■■□□ 2.86
COL5A2P05997 AC239859.2-201ENST00000444165 318 ntBASIC32.93■■■□□ 2.86
COL5A2P05997 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC32.93■■■□□ 2.86
COL5A2P05997 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
COL5A2P05997 TK2-216ENST00000564917 1156 ntTSL 3 BASIC32.93■■■□□ 2.86
COL5A2P05997 Z92544.1-202ENST00000571933 1220 ntBASIC32.93■■■□□ 2.86
COL5A2P05997 LSM7-203ENST00000585409 512 ntTSL 2 BASIC32.93■■■□□ 2.86
COL5A2P05997 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC32.93■■■□□ 2.86
COL5A2P05997 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC32.92■■■□□ 2.86
COL5A2P05997 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC32.92■■■□□ 2.86
COL5A2P05997 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC32.92■■■□□ 2.86
COL5A2P05997 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC32.92■■■□□ 2.86
COL5A2P05997 CREM-229ENST00000474362 1030 ntTSL 2 BASIC32.92■■■□□ 2.86
COL5A2P05997 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC32.91■■■□□ 2.86
COL5A2P05997 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
COL5A2P05997 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC32.89■■■□□ 2.86
COL5A2P05997 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC32.89■■■□□ 2.86
COL5A2P05997 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC32.88■■■□□ 2.85
COL5A2P05997 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC32.88■■■□□ 2.85
COL5A2P05997 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC32.87■■■□□ 2.85
COL5A2P05997 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC32.87■■■□□ 2.85
COL5A2P05997 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC32.87■■■□□ 2.85
COL5A2P05997 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
COL5A2P05997 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC32.86■■■□□ 2.85
COL5A2P05997 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC32.86■■■□□ 2.85
COL5A2P05997 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC32.85■■■□□ 2.85
COL5A2P05997 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC32.85■■■□□ 2.85
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms