Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRBV12-3P01733 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC19.02■□□□□ 0.64
TRBV12-3P01733 AC092296.2-201ENST00000589470 999 ntBASIC19.02■□□□□ 0.64
TRBV12-3P01733 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
TRBV12-3P01733 AL359504.2-201ENST00000605506 1601 ntBASIC19.02■□□□□ 0.64
TRBV12-3P01733 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC19.02■□□□□ 0.63
TRBV12-3P01733 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TRBV12-3P01733 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRBV12-3P01733 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRBV12-3P01733 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC19.01■□□□□ 0.63
TRBV12-3P01733 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC19.01■□□□□ 0.63
TRBV12-3P01733 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC19.01■□□□□ 0.63
TRBV12-3P01733 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRBV12-3P01733 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC19■□□□□ 0.63
TRBV12-3P01733 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC19■□□□□ 0.63
TRBV12-3P01733 AC142472.1-201ENST00000612013 1741 ntBASIC19■□□□□ 0.63
TRBV12-3P01733 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRBV12-3P01733 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
TRBV12-3P01733 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRBV12-3P01733 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRBV12-3P01733 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC18.99■□□□□ 0.63
TRBV12-3P01733 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TRBV12-3P01733 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TRBV12-3P01733 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC18.98■□□□□ 0.63
TRBV12-3P01733 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC18.98■□□□□ 0.63
TRBV12-3P01733 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
TRBV12-3P01733 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRBV12-3P01733 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC18.97■□□□□ 0.63
TRBV12-3P01733 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC18.97■□□□□ 0.63
TRBV12-3P01733 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
TRBV12-3P01733 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC18.97■□□□□ 0.63
TRBV12-3P01733 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC18.97■□□□□ 0.63
TRBV12-3P01733 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRBV12-3P01733 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRBV12-3P01733 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRBV12-3P01733 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC18.96■□□□□ 0.63
TRBV12-3P01733 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC18.96■□□□□ 0.63
TRBV12-3P01733 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRBV12-3P01733 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRBV12-3P01733 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRBV12-3P01733 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC18.95■□□□□ 0.62
TRBV12-3P01733 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRBV12-3P01733 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRBV12-3P01733 RNF126P1-201ENST00000567452 1320 ntBASIC18.95■□□□□ 0.62
TRBV12-3P01733 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRBV12-3P01733 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC18.95■□□□□ 0.62
TRBV12-3P01733 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
TRBV12-3P01733 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRBV12-3P01733 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC18.94■□□□□ 0.62
TRBV12-3P01733 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRBV12-3P01733 ECEL1P2-201ENST00000461596 1295 ntBASIC18.94■□□□□ 0.62
TRBV12-3P01733 BRD4-212ENST00000630599 726 ntTSL 2 BASIC18.94■□□□□ 0.62
TRBV12-3P01733 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRBV12-3P01733 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC18.94■□□□□ 0.62
TRBV12-3P01733 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRBV12-3P01733 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
TRBV12-3P01733 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRBV12-3P01733 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC18.93■□□□□ 0.62
TRBV12-3P01733 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC18.93■□□□□ 0.62
TRBV12-3P01733 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRBV12-3P01733 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRBV12-3P01733 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRBV12-3P01733 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRBV12-3P01733 HES4-202ENST00000428771 1040 ntTSL 2 BASIC18.93■□□□□ 0.62
TRBV12-3P01733 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRBV12-3P01733 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRBV12-3P01733 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRBV12-3P01733 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
TRBV12-3P01733 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRBV12-3P01733 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRBV12-3P01733 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC18.92■□□□□ 0.62
TRBV12-3P01733 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRBV12-3P01733 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRBV12-3P01733 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRBV12-3P01733 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
TRBV12-3P01733 SMPD5-203ENST00000639008 1464 ntBASIC18.91■□□□□ 0.62
TRBV12-3P01733 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC18.91■□□□□ 0.62
TRBV12-3P01733 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRBV12-3P01733 RARRES2P2-201ENST00000394842 485 ntBASIC18.91■□□□□ 0.62
TRBV12-3P01733 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC18.91■□□□□ 0.62
TRBV12-3P01733 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC18.91■□□□□ 0.62
TRBV12-3P01733 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC18.91■□□□□ 0.62
TRBV12-3P01733 AC025884.2-201ENST00000553429 711 ntBASIC18.91■□□□□ 0.62
TRBV12-3P01733 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRBV12-3P01733 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRBV12-3P01733 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRBV12-3P01733 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRBV12-3P01733 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRBV12-3P01733 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRBV12-3P01733 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC18.9■□□□□ 0.62
TRBV12-3P01733 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
TRBV12-3P01733 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRBV12-3P01733 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC18.89■□□□□ 0.61
TRBV12-3P01733 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
TRBV12-3P01733 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC18.89■□□□□ 0.61
TRBV12-3P01733 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
TRBV12-3P01733 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
TRBV12-3P01733 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRBV12-3P01733 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC18.88■□□□□ 0.61
TRBV12-3P01733 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 125.8 ms