Protein–RNA interactions for Protein: P01138

NGF, Beta-nerve growth factor, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NGFP01138 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC21.3■■□□□ 1
NGFP01138 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC21.29■■□□□ 1
NGFP01138 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC21.29■■□□□ 1
NGFP01138 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC21.29■■□□□ 1
NGFP01138 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC21.29■■□□□ 1
NGFP01138 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.29■■□□□ 1
NGFP01138 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NGFP01138 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NGFP01138 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC21.28■■□□□ 1
NGFP01138 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NGFP01138 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC21.28■■□□□ 1
NGFP01138 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NGFP01138 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
NGFP01138 AC142472.1-201ENST00000612013 1741 ntBASIC21.28■■□□□ 1
NGFP01138 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NGFP01138 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NGFP01138 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NGFP01138 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC21.27■■□□□ 1
NGFP01138 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
NGFP01138 AL359504.2-201ENST00000605506 1601 ntBASIC21.26■□□□□ 0.99
NGFP01138 GPX1-201ENST00000419349 1106 ntBASIC21.26■□□□□ 0.99
NGFP01138 ABHD17AP3-201ENST00000503096 1137 ntBASIC21.26■□□□□ 0.99
NGFP01138 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NGFP01138 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC21.26■□□□□ 0.99
NGFP01138 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
NGFP01138 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC21.26■□□□□ 0.99
NGFP01138 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
NGFP01138 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NGFP01138 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
NGFP01138 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.25■□□□□ 0.99
NGFP01138 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NGFP01138 AL157400.5-201ENST00000507624 621 ntBASIC21.24■□□□□ 0.99
NGFP01138 MOB2-207ENST00000614710 705 ntTSL 5 BASIC21.24■□□□□ 0.99
NGFP01138 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
NGFP01138 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NGFP01138 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NGFP01138 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
NGFP01138 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
NGFP01138 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NGFP01138 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
NGFP01138 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
NGFP01138 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NGFP01138 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
NGFP01138 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
NGFP01138 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
NGFP01138 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NGFP01138 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
NGFP01138 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
NGFP01138 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
NGFP01138 AC092296.2-201ENST00000589470 999 ntBASIC21.22■□□□□ 0.99
NGFP01138 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21.22■□□□□ 0.99
NGFP01138 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NGFP01138 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
NGFP01138 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC21.21■□□□□ 0.99
NGFP01138 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NGFP01138 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
NGFP01138 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NGFP01138 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NGFP01138 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC21.2■□□□□ 0.98
NGFP01138 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
NGFP01138 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
NGFP01138 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC21.19■□□□□ 0.98
NGFP01138 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC21.19■□□□□ 0.98
NGFP01138 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC21.19■□□□□ 0.98
NGFP01138 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
NGFP01138 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
NGFP01138 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NGFP01138 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NGFP01138 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NGFP01138 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NGFP01138 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NGFP01138 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NGFP01138 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NGFP01138 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC21.18■□□□□ 0.98
NGFP01138 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
NGFP01138 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
NGFP01138 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
NGFP01138 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
NGFP01138 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC21.17■□□□□ 0.98
NGFP01138 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NGFP01138 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
NGFP01138 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC21.16■□□□□ 0.98
NGFP01138 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC21.16■□□□□ 0.98
NGFP01138 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
NGFP01138 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC21.16■□□□□ 0.98
NGFP01138 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NGFP01138 ECEL1P2-201ENST00000461596 1295 ntBASIC21.15■□□□□ 0.98
NGFP01138 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC21.15■□□□□ 0.98
NGFP01138 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NGFP01138 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21.14■□□□□ 0.98
NGFP01138 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
NGFP01138 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.14■□□□□ 0.98
NGFP01138 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
NGFP01138 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC21.14■□□□□ 0.97
NGFP01138 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NGFP01138 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC21.14■□□□□ 0.97
NGFP01138 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NGFP01138 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
NGFP01138 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
NGFP01138 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 10.3 ms