Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
CSPG5O95196 HYI-210ENST00000486909 905 ntTSL 5 BASIC26.48■■□□□ 1.83
CSPG5O95196 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC26.48■■□□□ 1.83
CSPG5O95196 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
CSPG5O95196 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC26.48■■□□□ 1.83
CSPG5O95196 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
CSPG5O95196 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC26.47■■□□□ 1.83
CSPG5O95196 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
CSPG5O95196 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC26.47■■□□□ 1.83
CSPG5O95196 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
CSPG5O95196 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
CSPG5O95196 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC26.46■■□□□ 1.83
CSPG5O95196 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
CSPG5O95196 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CSPG5O95196 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CSPG5O95196 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC26.46■■□□□ 1.83
CSPG5O95196 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC26.46■■□□□ 1.83
CSPG5O95196 AC074183.2-201ENST00000623112 922 ntBASIC26.46■■□□□ 1.83
CSPG5O95196 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC26.46■■□□□ 1.83
CSPG5O95196 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC26.46■■□□□ 1.83
CSPG5O95196 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC26.45■■□□□ 1.82
CSPG5O95196 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC26.45■■□□□ 1.82
CSPG5O95196 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC26.45■■□□□ 1.82
CSPG5O95196 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
CSPG5O95196 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC26.44■■□□□ 1.82
CSPG5O95196 HES6-204ENST00000409182 863 ntTSL 2 BASIC26.44■■□□□ 1.82
CSPG5O95196 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC26.44■■□□□ 1.82
CSPG5O95196 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
CSPG5O95196 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC26.44■■□□□ 1.82
CSPG5O95196 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
CSPG5O95196 GUSBP5-201ENST00000418136 578 ntBASIC26.43■■□□□ 1.82
CSPG5O95196 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
CSPG5O95196 OR2A1-AS1-204ENST00000470435 602 ntBASIC26.43■■□□□ 1.82
CSPG5O95196 PFN2-211ENST00000489155 636 ntTSL 4 BASIC26.43■■□□□ 1.82
CSPG5O95196 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
CSPG5O95196 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC26.43■■□□□ 1.82
CSPG5O95196 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC26.43■■□□□ 1.82
CSPG5O95196 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC26.42■■□□□ 1.82
CSPG5O95196 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
CSPG5O95196 AL139393.2-201ENST00000608721 2025 ntBASIC26.41■■□□□ 1.82
CSPG5O95196 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
CSPG5O95196 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
CSPG5O95196 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC26.41■■□□□ 1.82
CSPG5O95196 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC26.4■■□□□ 1.82
CSPG5O95196 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC26.4■■□□□ 1.82
CSPG5O95196 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
CSPG5O95196 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC26.39■■□□□ 1.82
CSPG5O95196 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC26.39■■□□□ 1.82
CSPG5O95196 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
CSPG5O95196 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CSPG5O95196 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CSPG5O95196 AL031848.2-201ENST00000607670 837 ntBASIC26.37■■□□□ 1.81
CSPG5O95196 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC26.36■■□□□ 1.81
CSPG5O95196 AL359504.2-201ENST00000605506 1601 ntBASIC26.36■■□□□ 1.81
CSPG5O95196 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
CSPG5O95196 AC103724.3-201ENST00000564481 992 ntBASIC26.36■■□□□ 1.81
CSPG5O95196 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CSPG5O95196 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
CSPG5O95196 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC26.35■■□□□ 1.81
CSPG5O95196 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CSPG5O95196 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
CSPG5O95196 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC26.35■■□□□ 1.81
CSPG5O95196 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC26.34■■□□□ 1.81
CSPG5O95196 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC26.33■■□□□ 1.81
CSPG5O95196 PRTG-204ENST00000561292 833 ntTSL 3 BASIC26.33■■□□□ 1.81
CSPG5O95196 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
CSPG5O95196 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
CSPG5O95196 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC26.33■■□□□ 1.81
CSPG5O95196 ABCB10P1-201ENST00000614297 2181 ntBASIC26.33■■□□□ 1.81
CSPG5O95196 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
CSPG5O95196 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC26.32■■□□□ 1.8
CSPG5O95196 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC26.32■■□□□ 1.8
CSPG5O95196 AL356441.2-201ENST00000443009 864 ntBASIC26.32■■□□□ 1.8
CSPG5O95196 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CSPG5O95196 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
CSPG5O95196 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC26.32■■□□□ 1.8
CSPG5O95196 MIR4508-201ENST00000584178 70 ntBASIC26.31■■□□□ 1.8
CSPG5O95196 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC26.31■■□□□ 1.8
CSPG5O95196 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CSPG5O95196 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
CSPG5O95196 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CSPG5O95196 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
CSPG5O95196 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC26.29■■□□□ 1.8
CSPG5O95196 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
CSPG5O95196 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
CSPG5O95196 AP002414.2-202ENST00000590929 1450 ntBASIC26.29■■□□□ 1.8
CSPG5O95196 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC26.28■■□□□ 1.8
CSPG5O95196 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC26.28■■□□□ 1.8
CSPG5O95196 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC26.28■■□□□ 1.8
CSPG5O95196 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
CSPG5O95196 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC26.28■■□□□ 1.8
CSPG5O95196 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
CSPG5O95196 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CSPG5O95196 AC239859.2-201ENST00000444165 318 ntBASIC26.27■■□□□ 1.8
CSPG5O95196 RNF146-205ENST00000477776 762 ntTSL 3 BASIC26.27■■□□□ 1.8
CSPG5O95196 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC26.27■■□□□ 1.8
CSPG5O95196 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CSPG5O95196 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC26.27■■□□□ 1.8
CSPG5O95196 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
CSPG5O95196 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms