Protein–RNA interactions for Protein: O75818

RPP40, Ribonuclease P protein subunit p40, humanhuman

Known RBP Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40O75818 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
RPP40O75818 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC25.27■■□□□ 1.64
RPP40O75818 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC25.27■■□□□ 1.64
RPP40O75818 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC25.26■■□□□ 1.63
RPP40O75818 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC25.26■■□□□ 1.63
RPP40O75818 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
RPP40O75818 TRIR-205ENST00000592273 783 ntTSL 3 BASIC25.26■■□□□ 1.63
RPP40O75818 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC25.26■■□□□ 1.63
RPP40O75818 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
RPP40O75818 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
RPP40O75818 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC25.25■■□□□ 1.63
RPP40O75818 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
RPP40O75818 SMPD5-203ENST00000639008 1464 ntBASIC25.24■■□□□ 1.63
RPP40O75818 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
RPP40O75818 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC25.23■■□□□ 1.63
RPP40O75818 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
RPP40O75818 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC25.23■■□□□ 1.63
RPP40O75818 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
RPP40O75818 SHF-208ENST00000560734 1731 ntTSL 3 BASIC25.23■■□□□ 1.63
RPP40O75818 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
RPP40O75818 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
RPP40O75818 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
RPP40O75818 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
RPP40O75818 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
RPP40O75818 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC25.21■■□□□ 1.63
RPP40O75818 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
RPP40O75818 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC25.21■■□□□ 1.63
RPP40O75818 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
RPP40O75818 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.62
RPP40O75818 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC25.2■■□□□ 1.62
RPP40O75818 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC25.2■■□□□ 1.62
RPP40O75818 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
RPP40O75818 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC25.2■■□□□ 1.62
RPP40O75818 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
RPP40O75818 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC25.2■■□□□ 1.62
RPP40O75818 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC25.2■■□□□ 1.62
RPP40O75818 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC25.2■■□□□ 1.62
RPP40O75818 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC25.2■■□□□ 1.62
RPP40O75818 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
RPP40O75818 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
RPP40O75818 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC25.19■■□□□ 1.62
RPP40O75818 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
RPP40O75818 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC25.18■■□□□ 1.62
RPP40O75818 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
RPP40O75818 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
RPP40O75818 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC25.18■■□□□ 1.62
RPP40O75818 AC026202.3-201ENST00000600805 1127 ntBASIC25.18■■□□□ 1.62
RPP40O75818 BHLHE23-202ENST00000612929 1109 ntBASIC25.18■■□□□ 1.62
RPP40O75818 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
RPP40O75818 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
RPP40O75818 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
RPP40O75818 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
RPP40O75818 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
RPP40O75818 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC25.16■■□□□ 1.62
RPP40O75818 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC25.16■■□□□ 1.62
RPP40O75818 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
RPP40O75818 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
RPP40O75818 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
RPP40O75818 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC25.16■■□□□ 1.62
RPP40O75818 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
RPP40O75818 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
RPP40O75818 AL359258.2-201ENST00000564063 1566 ntBASIC25.15■■□□□ 1.62
RPP40O75818 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
RPP40O75818 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC25.15■■□□□ 1.62
RPP40O75818 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC25.15■■□□□ 1.62
RPP40O75818 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC25.15■■□□□ 1.62
RPP40O75818 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC25.15■■□□□ 1.62
RPP40O75818 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC25.15■■□□□ 1.62
RPP40O75818 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
RPP40O75818 DUX4L9-201ENST00000449051 1259 ntBASIC25.14■■□□□ 1.62
RPP40O75818 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC25.14■■□□□ 1.62
RPP40O75818 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC25.13■■□□□ 1.61
RPP40O75818 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
RPP40O75818 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
RPP40O75818 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
RPP40O75818 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC25.13■■□□□ 1.61
RPP40O75818 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
RPP40O75818 AL592295.1-201ENST00000400984 884 ntBASIC25.12■■□□□ 1.61
RPP40O75818 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC25.12■■□□□ 1.61
RPP40O75818 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC25.12■■□□□ 1.61
RPP40O75818 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC25.12■■□□□ 1.61
RPP40O75818 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
RPP40O75818 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC25.11■■□□□ 1.61
RPP40O75818 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
RPP40O75818 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC25.11■■□□□ 1.61
RPP40O75818 AC010980.1-201ENST00000587192 1142 ntBASIC25.11■■□□□ 1.61
RPP40O75818 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC25.11■■□□□ 1.61
RPP40O75818 AL121749.1-202ENST00000609313 2153 ntBASIC25.11■■□□□ 1.61
RPP40O75818 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
RPP40O75818 KRT8P33-201ENST00000508125 1423 ntBASIC25.11■■□□□ 1.61
RPP40O75818 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC25.11■■□□□ 1.61
RPP40O75818 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
RPP40O75818 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC25.1■■□□□ 1.61
RPP40O75818 AC074183.2-201ENST00000623112 922 ntBASIC25.1■■□□□ 1.61
RPP40O75818 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
RPP40O75818 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC25.1■■□□□ 1.61
RPP40O75818 RP9P-202ENST00000450133 1212 ntBASIC25.09■■□□□ 1.61
RPP40O75818 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
RPP40O75818 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC25.09■■□□□ 1.61
RPP40O75818 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC25.09■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms