Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 PKM-203ENST00000389093 2279 ntTSL 5 BASIC21.02■□□□□ 0.95
PHF1O43189 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
PHF1O43189 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC21.02■□□□□ 0.95
PHF1O43189 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
PHF1O43189 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
PHF1O43189 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC21.01■□□□□ 0.95
PHF1O43189 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PHF1O43189 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PHF1O43189 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC21.01■□□□□ 0.95
PHF1O43189 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PHF1O43189 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
PHF1O43189 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
PHF1O43189 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PHF1O43189 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC21■□□□□ 0.95
PHF1O43189 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC21■□□□□ 0.95
PHF1O43189 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
PHF1O43189 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC21■□□□□ 0.95
PHF1O43189 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PHF1O43189 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
PHF1O43189 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PHF1O43189 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
PHF1O43189 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC20.99■□□□□ 0.95
PHF1O43189 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC20.98■□□□□ 0.95
PHF1O43189 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PHF1O43189 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC20.98■□□□□ 0.95
PHF1O43189 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PHF1O43189 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC20.98■□□□□ 0.95
PHF1O43189 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PHF1O43189 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PHF1O43189 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC20.97■□□□□ 0.95
PHF1O43189 U85056.1-201ENST00000616429 682 ntBASIC20.97■□□□□ 0.95
PHF1O43189 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PHF1O43189 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC20.97■□□□□ 0.95
PHF1O43189 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
PHF1O43189 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC20.96■□□□□ 0.95
PHF1O43189 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
PHF1O43189 MIR219A2-201ENST00000608502 1504 ntBASIC20.96■□□□□ 0.95
PHF1O43189 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PHF1O43189 AC148477.6-201ENST00000623746 465 ntBASIC20.96■□□□□ 0.95
PHF1O43189 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
PHF1O43189 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PHF1O43189 RARRES2P1-201ENST00000474487 481 ntBASIC20.95■□□□□ 0.94
PHF1O43189 GFER-205ENST00000569451 517 ntTSL 5 BASIC20.95■□□□□ 0.94
PHF1O43189 AL449106.1-201ENST00000608517 1980 ntBASIC20.95■□□□□ 0.94
PHF1O43189 HYI-213ENST00000583037 1322 ntTSL 5 BASIC20.95■□□□□ 0.94
PHF1O43189 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PHF1O43189 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC20.95■□□□□ 0.94
PHF1O43189 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PHF1O43189 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
PHF1O43189 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PHF1O43189 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC20.94■□□□□ 0.94
PHF1O43189 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PHF1O43189 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PHF1O43189 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC20.94■□□□□ 0.94
PHF1O43189 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PHF1O43189 TSPY13P-201ENST00000338964 914 ntBASIC20.94■□□□□ 0.94
PHF1O43189 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PHF1O43189 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.93■□□□□ 0.94
PHF1O43189 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
PHF1O43189 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PHF1O43189 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC20.93■□□□□ 0.94
PHF1O43189 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PHF1O43189 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
PHF1O43189 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PHF1O43189 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
PHF1O43189 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC20.92■□□□□ 0.94
PHF1O43189 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
PHF1O43189 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PHF1O43189 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PHF1O43189 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PHF1O43189 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
PHF1O43189 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PHF1O43189 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
PHF1O43189 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
PHF1O43189 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PHF1O43189 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC20.89■□□□□ 0.93
PHF1O43189 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PHF1O43189 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PHF1O43189 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
PHF1O43189 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PHF1O43189 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC20.88■□□□□ 0.93
PHF1O43189 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PHF1O43189 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PHF1O43189 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
PHF1O43189 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC20.87■□□□□ 0.93
PHF1O43189 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PHF1O43189 AC004987.1-201ENST00000428627 508 ntBASIC20.87■□□□□ 0.93
PHF1O43189 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC20.87■□□□□ 0.93
PHF1O43189 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC20.87■□□□□ 0.93
PHF1O43189 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PHF1O43189 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PHF1O43189 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PHF1O43189 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PHF1O43189 ATP5G2P3-201ENST00000429083 425 ntBASIC20.86■□□□□ 0.93
PHF1O43189 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PHF1O43189 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
PHF1O43189 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PHF1O43189 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PHF1O43189 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PHF1O43189 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms