Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 MED25-210ENST00000612854 801 ntTSL 5 BASIC23.37■■□□□ 1.33
PCDH17O14917 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
PCDH17O14917 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
PCDH17O14917 MED25-214ENST00000622402 642 ntTSL 5 BASIC23.37■■□□□ 1.33
PCDH17O14917 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
PCDH17O14917 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
PCDH17O14917 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
PCDH17O14917 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
PCDH17O14917 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC23.36■■□□□ 1.33
PCDH17O14917 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PCDH17O14917 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
PCDH17O14917 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC23.35■■□□□ 1.33
PCDH17O14917 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
PCDH17O14917 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC23.35■■□□□ 1.33
PCDH17O14917 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
PCDH17O14917 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PCDH17O14917 REST-210ENST00000638187 1334 ntTSL 5 BASIC23.34■■□□□ 1.33
PCDH17O14917 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC23.34■■□□□ 1.33
PCDH17O14917 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
PCDH17O14917 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PCDH17O14917 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC23.34■■□□□ 1.33
PCDH17O14917 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC23.34■■□□□ 1.33
PCDH17O14917 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC23.33■■□□□ 1.33
PCDH17O14917 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC23.33■■□□□ 1.33
PCDH17O14917 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
PCDH17O14917 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PCDH17O14917 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
PCDH17O14917 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PCDH17O14917 AL359258.2-201ENST00000564063 1566 ntBASIC23.32■■□□□ 1.32
PCDH17O14917 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PCDH17O14917 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC23.31■■□□□ 1.32
PCDH17O14917 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PCDH17O14917 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC23.31■■□□□ 1.32
PCDH17O14917 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC23.31■■□□□ 1.32
PCDH17O14917 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
PCDH17O14917 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC23.31■■□□□ 1.32
PCDH17O14917 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC23.31■■□□□ 1.32
PCDH17O14917 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PCDH17O14917 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCDH17O14917 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC23.3■■□□□ 1.32
PCDH17O14917 AL157400.5-201ENST00000507624 621 ntBASIC23.29■■□□□ 1.32
PCDH17O14917 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
PCDH17O14917 NTF6A-201ENST00000591175 560 ntBASIC23.29■■□□□ 1.32
PCDH17O14917 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC23.29■■□□□ 1.32
PCDH17O14917 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC23.29■■□□□ 1.32
PCDH17O14917 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDH17O14917 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDH17O14917 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDH17O14917 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
PCDH17O14917 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
PCDH17O14917 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
PCDH17O14917 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PCDH17O14917 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC23.27■■□□□ 1.32
PCDH17O14917 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC23.27■■□□□ 1.32
PCDH17O14917 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC23.27■■□□□ 1.32
PCDH17O14917 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC23.27■■□□□ 1.32
PCDH17O14917 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PCDH17O14917 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC23.26■■□□□ 1.31
PCDH17O14917 MOB2-207ENST00000614710 705 ntTSL 5 BASIC23.26■■□□□ 1.31
PCDH17O14917 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
PCDH17O14917 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC23.26■■□□□ 1.31
PCDH17O14917 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC23.26■■□□□ 1.31
PCDH17O14917 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
PCDH17O14917 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PCDH17O14917 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
PCDH17O14917 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC23.25■■□□□ 1.31
PCDH17O14917 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC23.25■■□□□ 1.31
PCDH17O14917 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
PCDH17O14917 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
PCDH17O14917 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PCDH17O14917 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
PCDH17O14917 AL449106.1-201ENST00000608517 1980 ntBASIC23.23■■□□□ 1.31
PCDH17O14917 HYI-213ENST00000583037 1322 ntTSL 5 BASIC23.23■■□□□ 1.31
PCDH17O14917 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PCDH17O14917 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
PCDH17O14917 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PCDH17O14917 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
PCDH17O14917 AC007029.1-201ENST00000604183 313 ntBASIC23.22■■□□□ 1.31
PCDH17O14917 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC23.22■■□□□ 1.31
PCDH17O14917 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
PCDH17O14917 SMPD5-203ENST00000639008 1464 ntBASIC23.22■■□□□ 1.31
PCDH17O14917 AC135731.1-201ENST00000569415 2548 ntBASIC23.22■■□□□ 1.31
PCDH17O14917 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
PCDH17O14917 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PCDH17O14917 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PCDH17O14917 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
PCDH17O14917 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
PCDH17O14917 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
PCDH17O14917 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PCDH17O14917 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
PCDH17O14917 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
PCDH17O14917 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PCDH17O14917 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC23.2■■□□□ 1.3
PCDH17O14917 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
PCDH17O14917 AC025884.2-201ENST00000553429 711 ntBASIC23.19■■□□□ 1.3
PCDH17O14917 GFER-205ENST00000569451 517 ntTSL 5 BASIC23.19■■□□□ 1.3
PCDH17O14917 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC23.19■■□□□ 1.3
PCDH17O14917 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC23.19■■□□□ 1.3
PCDH17O14917 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC23.18■■□□□ 1.3
PCDH17O14917 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms