Protein–RNA interactions for Protein: A8MYP8

ODF3B, Outer dense fiber protein 3B, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF3BA8MYP8 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
ODF3BA8MYP8 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
ODF3BA8MYP8 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC19.93■□□□□ 0.78
ODF3BA8MYP8 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ODF3BA8MYP8 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ODF3BA8MYP8 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC19.93■□□□□ 0.78
ODF3BA8MYP8 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ODF3BA8MYP8 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
ODF3BA8MYP8 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
ODF3BA8MYP8 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC19.92■□□□□ 0.78
ODF3BA8MYP8 MIR3960-201ENST00000583311 91 ntBASIC19.92■□□□□ 0.78
ODF3BA8MYP8 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ODF3BA8MYP8 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ODF3BA8MYP8 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC19.91■□□□□ 0.78
ODF3BA8MYP8 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
ODF3BA8MYP8 ABHD17AP5-201ENST00000580133 923 ntBASIC19.91■□□□□ 0.78
ODF3BA8MYP8 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ODF3BA8MYP8 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
ODF3BA8MYP8 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC19.91■□□□□ 0.78
ODF3BA8MYP8 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ODF3BA8MYP8 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC19.9■□□□□ 0.78
ODF3BA8MYP8 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ODF3BA8MYP8 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
ODF3BA8MYP8 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ODF3BA8MYP8 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ODF3BA8MYP8 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC19.89■□□□□ 0.77
ODF3BA8MYP8 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC19.89■□□□□ 0.77
ODF3BA8MYP8 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
ODF3BA8MYP8 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ODF3BA8MYP8 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ODF3BA8MYP8 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ODF3BA8MYP8 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC19.88■□□□□ 0.77
ODF3BA8MYP8 RP9P-202ENST00000450133 1212 ntBASIC19.88■□□□□ 0.77
ODF3BA8MYP8 GFER-205ENST00000569451 517 ntTSL 5 BASIC19.88■□□□□ 0.77
ODF3BA8MYP8 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC19.88■□□□□ 0.77
ODF3BA8MYP8 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
ODF3BA8MYP8 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
ODF3BA8MYP8 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
ODF3BA8MYP8 AL121749.1-202ENST00000609313 2153 ntBASIC19.87■□□□□ 0.77
ODF3BA8MYP8 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
ODF3BA8MYP8 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC19.87■□□□□ 0.77
ODF3BA8MYP8 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ODF3BA8MYP8 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC19.87■□□□□ 0.77
ODF3BA8MYP8 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
ODF3BA8MYP8 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
ODF3BA8MYP8 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
ODF3BA8MYP8 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
ODF3BA8MYP8 HYI-213ENST00000583037 1322 ntTSL 5 BASIC19.86■□□□□ 0.77
ODF3BA8MYP8 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
ODF3BA8MYP8 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
ODF3BA8MYP8 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ODF3BA8MYP8 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ODF3BA8MYP8 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ODF3BA8MYP8 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC19.86■□□□□ 0.77
ODF3BA8MYP8 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC19.85■□□□□ 0.77
ODF3BA8MYP8 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC19.85■□□□□ 0.77
ODF3BA8MYP8 AC093536.1-201ENST00000569153 554 ntBASIC19.85■□□□□ 0.77
ODF3BA8MYP8 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
ODF3BA8MYP8 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ODF3BA8MYP8 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
ODF3BA8MYP8 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ODF3BA8MYP8 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ODF3BA8MYP8 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC19.84■□□□□ 0.77
ODF3BA8MYP8 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
ODF3BA8MYP8 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ODF3BA8MYP8 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
ODF3BA8MYP8 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
ODF3BA8MYP8 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC19.84■□□□□ 0.77
ODF3BA8MYP8 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
ODF3BA8MYP8 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
ODF3BA8MYP8 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ODF3BA8MYP8 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
ODF3BA8MYP8 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
ODF3BA8MYP8 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ODF3BA8MYP8 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ODF3BA8MYP8 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ODF3BA8MYP8 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ODF3BA8MYP8 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ODF3BA8MYP8 AC026202.3-201ENST00000600805 1127 ntBASIC19.82■□□□□ 0.76
ODF3BA8MYP8 RAP2CP1-202ENST00000605179 643 ntBASIC19.82■□□□□ 0.76
ODF3BA8MYP8 AC009831.1-201ENST00000580420 1582 ntBASIC19.82■□□□□ 0.76
ODF3BA8MYP8 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
ODF3BA8MYP8 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ODF3BA8MYP8 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
ODF3BA8MYP8 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
ODF3BA8MYP8 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC19.81■□□□□ 0.76
ODF3BA8MYP8 U85056.1-201ENST00000616429 682 ntBASIC19.81■□□□□ 0.76
ODF3BA8MYP8 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
ODF3BA8MYP8 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC19.81■□□□□ 0.76
ODF3BA8MYP8 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ODF3BA8MYP8 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ODF3BA8MYP8 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ODF3BA8MYP8 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
ODF3BA8MYP8 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
ODF3BA8MYP8 NTF6A-201ENST00000591175 560 ntBASIC19.8■□□□□ 0.76
ODF3BA8MYP8 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ODF3BA8MYP8 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
ODF3BA8MYP8 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ODF3BA8MYP8 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ODF3BA8MYP8 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms