Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
TMEM235A6NFC5 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TMEM235A6NFC5 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TMEM235A6NFC5 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
TMEM235A6NFC5 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC20.82■□□□□ 0.92
TMEM235A6NFC5 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TMEM235A6NFC5 DUX4L28-201ENST00000623687 678 ntBASIC20.82■□□□□ 0.92
TMEM235A6NFC5 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
TMEM235A6NFC5 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
TMEM235A6NFC5 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TMEM235A6NFC5 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
TMEM235A6NFC5 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TMEM235A6NFC5 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC20.81■□□□□ 0.92
TMEM235A6NFC5 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
TMEM235A6NFC5 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.8■□□□□ 0.92
TMEM235A6NFC5 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TMEM235A6NFC5 AC010501.1-201ENST00000606270 1962 ntBASIC20.8■□□□□ 0.92
TMEM235A6NFC5 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TMEM235A6NFC5 PEX7-203ENST00000541292 945 ntTSL 5 BASIC20.8■□□□□ 0.92
TMEM235A6NFC5 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TMEM235A6NFC5 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC20.8■□□□□ 0.92
TMEM235A6NFC5 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TMEM235A6NFC5 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TMEM235A6NFC5 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TMEM235A6NFC5 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC20.79■□□□□ 0.92
TMEM235A6NFC5 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.78■□□□□ 0.92
TMEM235A6NFC5 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TMEM235A6NFC5 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
TMEM235A6NFC5 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
TMEM235A6NFC5 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TMEM235A6NFC5 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TMEM235A6NFC5 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TMEM235A6NFC5 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
TMEM235A6NFC5 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TMEM235A6NFC5 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
TMEM235A6NFC5 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TMEM235A6NFC5 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TMEM235A6NFC5 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
TMEM235A6NFC5 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
TMEM235A6NFC5 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.76■□□□□ 0.91
TMEM235A6NFC5 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TMEM235A6NFC5 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TMEM235A6NFC5 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TMEM235A6NFC5 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.75■□□□□ 0.91
TMEM235A6NFC5 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
TMEM235A6NFC5 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC20.75■□□□□ 0.91
TMEM235A6NFC5 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TMEM235A6NFC5 AC142381.3-201ENST00000568208 1670 ntBASIC20.74■□□□□ 0.91
TMEM235A6NFC5 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.74■□□□□ 0.91
TMEM235A6NFC5 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
TMEM235A6NFC5 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC20.74■□□□□ 0.91
TMEM235A6NFC5 CIB2-204ENST00000557846 934 ntTSL 3 BASIC20.73■□□□□ 0.91
TMEM235A6NFC5 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.73■□□□□ 0.91
TMEM235A6NFC5 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TMEM235A6NFC5 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.72■□□□□ 0.91
TMEM235A6NFC5 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TMEM235A6NFC5 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC20.72■□□□□ 0.91
TMEM235A6NFC5 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
TMEM235A6NFC5 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TMEM235A6NFC5 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TMEM235A6NFC5 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TMEM235A6NFC5 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TMEM235A6NFC5 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
TMEM235A6NFC5 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TMEM235A6NFC5 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TMEM235A6NFC5 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TMEM235A6NFC5 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TMEM235A6NFC5 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TMEM235A6NFC5 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC20.71■□□□□ 0.91
TMEM235A6NFC5 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TMEM235A6NFC5 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TMEM235A6NFC5 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TMEM235A6NFC5 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TMEM235A6NFC5 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TMEM235A6NFC5 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TMEM235A6NFC5 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC20.69■□□□□ 0.9
TMEM235A6NFC5 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TMEM235A6NFC5 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC20.69■□□□□ 0.9
TMEM235A6NFC5 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC20.69■□□□□ 0.9
TMEM235A6NFC5 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TMEM235A6NFC5 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TMEM235A6NFC5 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TMEM235A6NFC5 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TMEM235A6NFC5 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
TMEM235A6NFC5 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TMEM235A6NFC5 MIR3665-201ENST00000578708 105 ntBASIC20.68■□□□□ 0.9
TMEM235A6NFC5 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TMEM235A6NFC5 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TMEM235A6NFC5 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.68■□□□□ 0.9
TMEM235A6NFC5 AC022211.4-201ENST00000625094 2161 ntBASIC20.68■□□□□ 0.9
TMEM235A6NFC5 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TMEM235A6NFC5 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TMEM235A6NFC5 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TMEM235A6NFC5 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TMEM235A6NFC5 AC138932.3-201ENST00000567634 1902 ntBASIC20.66■□□□□ 0.9
TMEM235A6NFC5 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TMEM235A6NFC5 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TMEM235A6NFC5 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TMEM235A6NFC5 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TMEM235A6NFC5 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms