Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC24.75■■□□□ 1.55
CCDC163A0A0D9SF12 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC24.74■■□□□ 1.55
CCDC163A0A0D9SF12 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC24.74■■□□□ 1.55
CCDC163A0A0D9SF12 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
CCDC163A0A0D9SF12 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC24.73■■□□□ 1.55
CCDC163A0A0D9SF12 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
CCDC163A0A0D9SF12 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
CCDC163A0A0D9SF12 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
CCDC163A0A0D9SF12 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC24.72■■□□□ 1.55
CCDC163A0A0D9SF12 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
CCDC163A0A0D9SF12 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
CCDC163A0A0D9SF12 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC24.72■■□□□ 1.55
CCDC163A0A0D9SF12 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
CCDC163A0A0D9SF12 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC24.72■■□□□ 1.55
CCDC163A0A0D9SF12 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
CCDC163A0A0D9SF12 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC24.71■■□□□ 1.55
CCDC163A0A0D9SF12 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
CCDC163A0A0D9SF12 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC24.71■■□□□ 1.55
CCDC163A0A0D9SF12 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
CCDC163A0A0D9SF12 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
CCDC163A0A0D9SF12 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC24.7■■□□□ 1.54
CCDC163A0A0D9SF12 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC24.7■■□□□ 1.54
CCDC163A0A0D9SF12 Z92544.1-202ENST00000571933 1220 ntBASIC24.7■■□□□ 1.54
CCDC163A0A0D9SF12 AL359504.2-201ENST00000605506 1601 ntBASIC24.7■■□□□ 1.54
CCDC163A0A0D9SF12 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC24.69■■□□□ 1.54
CCDC163A0A0D9SF12 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC24.69■■□□□ 1.54
CCDC163A0A0D9SF12 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC24.69■■□□□ 1.54
CCDC163A0A0D9SF12 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC24.68■■□□□ 1.54
CCDC163A0A0D9SF12 AC087393.1-201ENST00000582896 145 ntBASIC24.68■■□□□ 1.54
CCDC163A0A0D9SF12 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC24.68■■□□□ 1.54
CCDC163A0A0D9SF12 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CCDC163A0A0D9SF12 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CCDC163A0A0D9SF12 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC24.67■■□□□ 1.54
CCDC163A0A0D9SF12 RNF146-205ENST00000477776 762 ntTSL 3 BASIC24.67■■□□□ 1.54
CCDC163A0A0D9SF12 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC24.67■■□□□ 1.54
CCDC163A0A0D9SF12 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC24.66■■□□□ 1.54
CCDC163A0A0D9SF12 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC24.66■■□□□ 1.54
CCDC163A0A0D9SF12 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CCDC163A0A0D9SF12 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CCDC163A0A0D9SF12 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CCDC163A0A0D9SF12 TK2-216ENST00000564917 1156 ntTSL 3 BASIC24.65■■□□□ 1.54
CCDC163A0A0D9SF12 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
CCDC163A0A0D9SF12 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
CCDC163A0A0D9SF12 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC24.65■■□□□ 1.54
CCDC163A0A0D9SF12 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CCDC163A0A0D9SF12 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
CCDC163A0A0D9SF12 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
CCDC163A0A0D9SF12 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CCDC163A0A0D9SF12 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC24.65■■□□□ 1.54
CCDC163A0A0D9SF12 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC24.64■■□□□ 1.54
CCDC163A0A0D9SF12 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
CCDC163A0A0D9SF12 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
CCDC163A0A0D9SF12 AC239859.2-201ENST00000444165 318 ntBASIC24.64■■□□□ 1.54
CCDC163A0A0D9SF12 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CCDC163A0A0D9SF12 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
CCDC163A0A0D9SF12 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC24.63■■□□□ 1.53
CCDC163A0A0D9SF12 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC24.63■■□□□ 1.53
CCDC163A0A0D9SF12 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC24.63■■□□□ 1.53
CCDC163A0A0D9SF12 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
CCDC163A0A0D9SF12 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC24.62■■□□□ 1.53
CCDC163A0A0D9SF12 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC24.62■■□□□ 1.53
CCDC163A0A0D9SF12 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
CCDC163A0A0D9SF12 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC24.61■■□□□ 1.53
CCDC163A0A0D9SF12 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC24.61■■□□□ 1.53
CCDC163A0A0D9SF12 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CCDC163A0A0D9SF12 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC24.61■■□□□ 1.53
CCDC163A0A0D9SF12 ABCB10P3-201ENST00000561950 2166 ntBASIC24.61■■□□□ 1.53
CCDC163A0A0D9SF12 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
CCDC163A0A0D9SF12 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC24.61■■□□□ 1.53
CCDC163A0A0D9SF12 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC24.61■■□□□ 1.53
CCDC163A0A0D9SF12 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
CCDC163A0A0D9SF12 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC24.6■■□□□ 1.53
CCDC163A0A0D9SF12 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CCDC163A0A0D9SF12 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC24.6■■□□□ 1.53
CCDC163A0A0D9SF12 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
CCDC163A0A0D9SF12 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CCDC163A0A0D9SF12 LONRF2P2-201ENST00000439212 571 ntBASIC24.59■■□□□ 1.53
CCDC163A0A0D9SF12 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC24.59■■□□□ 1.53
CCDC163A0A0D9SF12 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CCDC163A0A0D9SF12 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC24.59■■□□□ 1.53
CCDC163A0A0D9SF12 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
CCDC163A0A0D9SF12 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
CCDC163A0A0D9SF12 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
CCDC163A0A0D9SF12 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC24.58■■□□□ 1.53
CCDC163A0A0D9SF12 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
CCDC163A0A0D9SF12 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC24.58■■□□□ 1.53
CCDC163A0A0D9SF12 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CCDC163A0A0D9SF12 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC24.58■■□□□ 1.53
CCDC163A0A0D9SF12 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
CCDC163A0A0D9SF12 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
CCDC163A0A0D9SF12 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC24.58■■□□□ 1.52
CCDC163A0A0D9SF12 AL139393.2-201ENST00000608721 2025 ntBASIC24.57■■□□□ 1.52
CCDC163A0A0D9SF12 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
CCDC163A0A0D9SF12 RPS2P7-201ENST00000447334 885 ntBASIC24.57■■□□□ 1.52
CCDC163A0A0D9SF12 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC24.57■■□□□ 1.52
CCDC163A0A0D9SF12 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
CCDC163A0A0D9SF12 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
CCDC163A0A0D9SF12 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC24.56■■□□□ 1.52
CCDC163A0A0D9SF12 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC24.56■■□□□ 1.52
CCDC163A0A0D9SF12 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC24.56■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 527.2 ms