Protein–RNA interactions for Protein: A0A075B6M9

TRBV23OR9-2, T-cell receptor beta variable 23/OR9-2 (pseudogene) (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV23OR9-2A0A075B6M9 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC24.03■■□□□ 1.44
TRBV23OR9-2A0A075B6M9 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC24.03■■□□□ 1.44
TRBV23OR9-2A0A075B6M9 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC24.03■■□□□ 1.44
TRBV23OR9-2A0A075B6M9 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
TRBV23OR9-2A0A075B6M9 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC24.03■■□□□ 1.44
TRBV23OR9-2A0A075B6M9 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC24.02■■□□□ 1.44
TRBV23OR9-2A0A075B6M9 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC24.02■■□□□ 1.44
TRBV23OR9-2A0A075B6M9 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
TRBV23OR9-2A0A075B6M9 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC24.02■■□□□ 1.44
TRBV23OR9-2A0A075B6M9 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
TRBV23OR9-2A0A075B6M9 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
TRBV23OR9-2A0A075B6M9 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
TRBV23OR9-2A0A075B6M9 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
TRBV23OR9-2A0A075B6M9 ATP5G2P3-201ENST00000429083 425 ntBASIC24.01■■□□□ 1.43
TRBV23OR9-2A0A075B6M9 PFN2-211ENST00000489155 636 ntTSL 4 BASIC24.01■■□□□ 1.43
TRBV23OR9-2A0A075B6M9 DUX4L18-201ENST00000553347 1267 ntBASIC24.01■■□□□ 1.43
TRBV23OR9-2A0A075B6M9 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC24.01■■□□□ 1.43
TRBV23OR9-2A0A075B6M9 AL449106.1-201ENST00000608517 1980 ntBASIC24.01■■□□□ 1.43
TRBV23OR9-2A0A075B6M9 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC24.01■■□□□ 1.43
TRBV23OR9-2A0A075B6M9 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC24■■□□□ 1.43
TRBV23OR9-2A0A075B6M9 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
TRBV23OR9-2A0A075B6M9 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
TRBV23OR9-2A0A075B6M9 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
TRBV23OR9-2A0A075B6M9 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC23.99■■□□□ 1.43
TRBV23OR9-2A0A075B6M9 TSPY13P-201ENST00000338964 914 ntBASIC23.99■■□□□ 1.43
TRBV23OR9-2A0A075B6M9 MIR3960-201ENST00000583311 91 ntBASIC23.99■■□□□ 1.43
TRBV23OR9-2A0A075B6M9 AC129492.7-201ENST00000622992 756 ntBASIC23.99■■□□□ 1.43
TRBV23OR9-2A0A075B6M9 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
TRBV23OR9-2A0A075B6M9 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
TRBV23OR9-2A0A075B6M9 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
TRBV23OR9-2A0A075B6M9 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC23.98■■□□□ 1.43
TRBV23OR9-2A0A075B6M9 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
TRBV23OR9-2A0A075B6M9 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
TRBV23OR9-2A0A075B6M9 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
TRBV23OR9-2A0A075B6M9 GFER-205ENST00000569451 517 ntTSL 5 BASIC23.98■■□□□ 1.43
TRBV23OR9-2A0A075B6M9 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
TRBV23OR9-2A0A075B6M9 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
TRBV23OR9-2A0A075B6M9 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC23.98■■□□□ 1.43
TRBV23OR9-2A0A075B6M9 AC142086.6-201ENST00000621154 1765 ntBASIC23.98■■□□□ 1.43
TRBV23OR9-2A0A075B6M9 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
TRBV23OR9-2A0A075B6M9 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC23.98■■□□□ 1.43
TRBV23OR9-2A0A075B6M9 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
TRBV23OR9-2A0A075B6M9 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
TRBV23OR9-2A0A075B6M9 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
TRBV23OR9-2A0A075B6M9 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
TRBV23OR9-2A0A075B6M9 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
TRBV23OR9-2A0A075B6M9 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC23.97■■□□□ 1.43
TRBV23OR9-2A0A075B6M9 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
TRBV23OR9-2A0A075B6M9 BX255925.1-201ENST00000566954 1854 ntBASIC23.97■■□□□ 1.43
TRBV23OR9-2A0A075B6M9 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC23.97■■□□□ 1.43
TRBV23OR9-2A0A075B6M9 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
TRBV23OR9-2A0A075B6M9 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
TRBV23OR9-2A0A075B6M9 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
TRBV23OR9-2A0A075B6M9 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
TRBV23OR9-2A0A075B6M9 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
TRBV23OR9-2A0A075B6M9 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
TRBV23OR9-2A0A075B6M9 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
TRBV23OR9-2A0A075B6M9 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
TRBV23OR9-2A0A075B6M9 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
TRBV23OR9-2A0A075B6M9 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
TRBV23OR9-2A0A075B6M9 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
TRBV23OR9-2A0A075B6M9 HES4-204ENST00000484667 667 ntTSL 3 BASIC23.94■■□□□ 1.42
TRBV23OR9-2A0A075B6M9 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC23.94■■□□□ 1.42
TRBV23OR9-2A0A075B6M9 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
TRBV23OR9-2A0A075B6M9 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
TRBV23OR9-2A0A075B6M9 GUK1-208ENST00000366728 842 ntTSL 2 BASIC23.93■■□□□ 1.42
TRBV23OR9-2A0A075B6M9 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
TRBV23OR9-2A0A075B6M9 RAP2CP1-202ENST00000605179 643 ntBASIC23.93■■□□□ 1.42
TRBV23OR9-2A0A075B6M9 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC23.92■■□□□ 1.42
TRBV23OR9-2A0A075B6M9 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
TRBV23OR9-2A0A075B6M9 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
TRBV23OR9-2A0A075B6M9 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC23.91■■□□□ 1.42
TRBV23OR9-2A0A075B6M9 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
TRBV23OR9-2A0A075B6M9 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
TRBV23OR9-2A0A075B6M9 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
TRBV23OR9-2A0A075B6M9 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.42
TRBV23OR9-2A0A075B6M9 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
TRBV23OR9-2A0A075B6M9 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC23.89■■□□□ 1.42
TRBV23OR9-2A0A075B6M9 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
TRBV23OR9-2A0A075B6M9 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
TRBV23OR9-2A0A075B6M9 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC23.89■■□□□ 1.41
TRBV23OR9-2A0A075B6M9 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
TRBV23OR9-2A0A075B6M9 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
TRBV23OR9-2A0A075B6M9 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
TRBV23OR9-2A0A075B6M9 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TRBV23OR9-2A0A075B6M9 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC23.88■■□□□ 1.41
TRBV23OR9-2A0A075B6M9 DUX4L9-201ENST00000449051 1259 ntBASIC23.88■■□□□ 1.41
TRBV23OR9-2A0A075B6M9 SPCS2P3-201ENST00000500401 656 ntBASIC23.88■■□□□ 1.41
TRBV23OR9-2A0A075B6M9 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC23.88■■□□□ 1.41
TRBV23OR9-2A0A075B6M9 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
TRBV23OR9-2A0A075B6M9 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
TRBV23OR9-2A0A075B6M9 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
TRBV23OR9-2A0A075B6M9 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC23.87■■□□□ 1.41
TRBV23OR9-2A0A075B6M9 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC23.87■■□□□ 1.41
TRBV23OR9-2A0A075B6M9 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
TRBV23OR9-2A0A075B6M9 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
TRBV23OR9-2A0A075B6M9 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
TRBV23OR9-2A0A075B6M9 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC23.85■■□□□ 1.41
TRBV23OR9-2A0A075B6M9 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TRBV23OR9-2A0A075B6M9 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC23.85■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms